LOCUS       XM_039092021            1904 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus oxysterol binding protein 2 (Osbp2),
            transcript variant X15, mRNA.
ACCESSION   XM_039092021
VERSION     XM_039092021.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092021.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1904
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1904
                     /gene="Osbp2"
                     /gene_synonym="RGD1309479"
                     /note="oxysterol binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:305475"
                     /db_xref="RGD:1310505"
     CDS             44..1771
                     /gene="Osbp2"
                     /gene_synonym="RGD1309479"
                     /codon_start=1
                     /product="oxysterol-binding protein 2 isoform X15"
                     /protein_id="XP_038947949.1"
                     /db_xref="GeneID:305475"
                     /db_xref="RGD:1310505"
                     /translation="MGKAAALSRGGGCAGRSRGLSSLFTVVPCLSCHTAAPGMNSSTL
                     GSGPAPKPQFQPVQAPERELLSEQVCQPISEPRSEPGSQTTFVPQPLGAGQESESLGL
                     WPGSGPNTKASPELPSPPRSTAESLPKPESKAGPKTQSVLRPGQSKTSAGSPVSGTSV
                     PMVSPPLDSYKGWLFKWTNYLKGYQRRWFVLGNGLLSYYRCIQDGITESPLGRNQGEM
                     AHTCRGTINLASAHFETEDSCGILLCNGARTYHLKASSEVDRQQWITVLELAKAKAIR
                     VMNTQSDDSGDDDEEPAAPADNSDLHHTLKTLSLKLDDLGTCNDLIAKHGAALQRSLN
                     ELDSLKIPSESGEKLKVVNERATLFRITSNAMINACKDFLELAEIHSRKWQRALNYEQ
                     EQRVHLEETIEQLAKQHNSLERAFCNTPGGPASSSKSFSEGSFLTSKGENSEEDEDTE
                     YFDAMEDSTSFITVITEAKEDSNIINPYGSATRVNLLSSSPRVLGSIQSTASCPSPEA
                     LAAWLSHTAHPQAPRARAHQPQCPCRKPEGGPGTTSVDWTSADNVREVGAHRSQGRPG
                     TSASGLERY"
ORIGIN      
        1 ccgcccccac tcggcgctcg gccgcgctcg ggtccacagc tctatgggga aagcggccgc
       61 tctaagccga ggcggcggct gcgctggccg ctcccgcggg ctctcgtcgc tgttcacggt
      121 tgtgccctgt ctgtcctgcc acacggcggc gccgggcatg aactcgtcca cgttgggctc
      181 agggccggcg ccaaagcctc aattccagcc tgtacaggca ccagagcggg agttgctgtc
      241 ggaacaggtg tgtcagccaa tttctgagcc gagatccgaa cctgggtccc agacgacgtt
      301 tgtgccacag cccttagggg ctgggcagga atcggaatca ctgggattgt ggccggggtc
      361 tgggcccaat accaaagctt caccagagct gccatccccg ccgcgatcaa cagcagagag
      421 tttgcccaaa cccgagtcta aggcggggcc gaagacccag tctgttctgc gaccaggaca
      481 gtcaaagact tctgccggga gtccagtgtc agggactagt gtcccaatgg tctcaccacc
      541 tctggacagc tacaagggct ggctcttcaa gtggactaac tacctgaagg gctaccagcg
      601 ccgctggttc gtgcttggca atggcctgct atcctactac aggtgcattc aggatggcat
      661 tactgagtca ccacttggca gaaaccaggg tgaaatggcc cacacctgcc gtggaaccat
      721 caacctggcc tccgcgcact tcgaaacaga ggactcttgt ggaatcttgc tatgcaacgg
      781 ggcaaggacc taccacctca aggccagctc agaggtggac cgtcagcaat ggatcaccgt
      841 tctggagttg gccaaggcca aggctatccg tgtgatgaac actcagtcag atgactctgg
      901 ggacgacgac gaagagcctg ctgcccctgc tgacaacagt gatctccacc acactcttaa
      961 gaccctctca ctgaagctag acgacctcgg cacgtgcaat gacctcattg ccaagcatgg
     1021 cgctgccctc cagcgctccc tgaatgagct ggacagtctt aagatcccat cagagagtgg
     1081 ggagaagctg aaggttgtga acgagcgggc caccctcttc cgcatcacat caaatgctat
     1141 gatcaacgcc tgtaaggact tcctggaact agcggagatt cacagccgga aatggcagcg
     1201 ggctctgaat tatgagcagg agcaacgagt ccacctggag gaaaccattg agcagttggc
     1261 caagcagcac aacagtcttg aacgggcctt ctgcaacacc cctggcgggc cagccagctc
     1321 cagcaagagc ttcagcgagg gaagcttctt gacttccaaa ggggagaaca gtgaagaaga
     1381 tgaagatact gagtactttg atgccatgga agactccaca tctttcatca ccgtaatcac
     1441 cgaggccaag gaagacagca acatcatcaa tccttatggt tctgcaacca gggtgaacct
     1501 gctctcctca tctccaaggg ttctgggctc catacagtca actgcttcct gcccgtctcc
     1561 tgaggctctg gctgcctggc tgagccacac tgcccatcca caggctccta gagcccgggc
     1621 ccatcagcct cagtgcccct gcagaaagcc tgagggtgga cctgggacga cctctgtgga
     1681 ctggacctca gcagataatg tacgtgaggt gggagcacac aggagccaag ggcggccggg
     1741 cacctcagcc tcagggttgg agaggtatta gatggtgcct cattcatgcc caaggattca
     1801 tgcaaagtga agaggcgagt ccggatccct gacaaaccca actatagcct taacctctgg
     1861 agcatcatga agaattgcat tggccgagag ctctcccgga tccc
//
