LOCUS       XM_039092017            3535 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus oxysterol binding protein 2 (Osbp2),
            transcript variant X11, mRNA.
ACCESSION   XM_039092017
VERSION     XM_039092017.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3535
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3535
                     /gene="Osbp2"
                     /gene_synonym="RGD1309479"
                     /note="oxysterol binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:305475"
                     /db_xref="RGD:1310505"
     CDS             47..2167
                     /gene="Osbp2"
                     /gene_synonym="RGD1309479"
                     /codon_start=1
                     /product="oxysterol-binding protein 2 isoform X11"
                     /protein_id="XP_038947945.1"
                     /db_xref="GeneID:305475"
                     /db_xref="RGD:1310505"
                     /translation="MRQMIQSLSDCCLPDDSGDDDEEPAAPADNSDLHHTLKTLSLKL
                     DDLGTCNDLIAKHGAALQRSLNELDSLKIPSESGEKLKVVNERATLFRITSNAMINAC
                     KDFLELAEIHSRKWQRALNYEQEQRVHLEETIEQLAKQHNSLERAFCNTPGGPASSSK
                     SFSEGSFLTSKGENSEEDEDTEYFDAMEDSTSFITVITEAKEDSNIINPYGSATRVNL
                     LSSSPRVLGSIQSTASCPSPEALAAWLSHTAHPQAPRARAHQPQCPCRKPEGGPGTTS
                     VDWTSADNVREVLDGASFMPKDSCKVKRRVRIPDKPNYSLNLWSIMKNCIGRELSRIP
                     MPVNFNEPLSMLQRLTEDLEYHHLLDKAVNCTSSVEQMCLVAAFSVSSYSTTVHRIAK
                     PFNPMLGETFELDRLEDMGLRSLCEQVSHHPPSAAHHVFSKHGWSLWQEITIASKFRG
                     KYISIMPLGAIHLEFQASGNHYVWRKSTSTVHNIIVGKLWIDQSGDIEIVNHKTKDRC
                     QLKFVPYSYFSKEAARKVTGVVSDSQGKAHYVLSGSWDEQMECSKIVHSSPSSDGKQK
                     TVYQTLPAKLLWRKYPLPENAENMYYFSELALTLNEQEEGVAPTDSRLRPDQRLMERG
                     RWDEANTEKQRLEEKQRLNRRRRLESCTAGCGGEEEKESDGYSPLWFEKRLDPLTGEM
                     ACIYKGGYWEAKEKKDWHMCPNIF"
ORIGIN      
        1 gccatgggcg gctctgctcc tccgattctt gggaattgta ccacgcatgc gccaaatgat
       61 ccagtccctc tctgattgct gcctaccaga tgactctggg gacgacgacg aagagcctgc
      121 tgcccctgct gacaacagtg atctccacca cactcttaag accctctcac tgaagctaga
      181 cgacctcggc acgtgcaatg acctcattgc caagcatggc gctgccctcc agcgctccct
      241 gaatgagctg gacagtctta agatcccatc agagagtggg gagaagctga aggttgtgaa
      301 cgagcgggcc accctcttcc gcatcacatc aaatgctatg atcaacgcct gtaaggactt
      361 cctggaacta gcggagattc acagccggaa atggcagcgg gctctgaatt atgagcagga
      421 gcaacgagtc cacctggagg aaaccattga gcagttggcc aagcagcaca acagtcttga
      481 acgggccttc tgcaacaccc ctggcgggcc agccagctcc agcaagagct tcagcgaggg
      541 aagcttcttg acttccaaag gggagaacag tgaagaagat gaagatactg agtactttga
      601 tgccatggaa gactccacat ctttcatcac cgtaatcacc gaggccaagg aagacagcaa
      661 catcatcaat ccttatggtt ctgcaaccag ggtgaacctg ctctcctcat ctccaagggt
      721 tctgggctcc atacagtcaa ctgcttcctg cccgtctcct gaggctctgg ctgcctggct
      781 gagccacact gcccatccac aggctcctag agcccgggcc catcagcctc agtgcccctg
      841 cagaaagcct gagggtggac ctgggacgac ctctgtggac tggacctcag cagataatgt
      901 acgtgaggta ttagatggtg cctcattcat gcccaaggat tcatgcaaag tgaagaggcg
      961 agtccggatc cctgacaaac ccaactatag ccttaacctc tggagcatca tgaagaattg
     1021 cattggccga gagctctccc ggatccccat gccggtgaac ttcaatgagc ccctgtccat
     1081 gctccagcga cttacagagg acctcgagta ccaccacctg ctggacaagg cggtgaactg
     1141 caccagctct gtggagcaga tgtgcctggt ggctgccttc tcggtgtcct cctactccac
     1201 caccgtgcac cgcatcgcca agcccttcaa cccgatgctg ggggagacct tcgagttgga
     1261 tcgcctggag gacatgggcc tgcgttctct ctgcgagcag gtgagccatc accccccgtc
     1321 tgctgcccac cacgtgttct ctaagcatgg ctggagcctc tggcaggaga tcaccatcgc
     1381 cagcaagttc cgggggaaat acatctccat catgccactt ggtgccatcc acctcgaatt
     1441 ccaggccagt ggcaatcact acgtgtggag gaagagtacc tccactgtgc acaacatcat
     1501 cgtgggcaag ctctggattg accagtcagg ggacattgag attgtgaacc acaagaccaa
     1561 ggaccggtgc cagctgaagt tcgtgcccta cagctacttc tccaaagagg cagcccgaaa
     1621 ggtgactgga gtggtgagcg acagccaggg caaggcccac tacgtgctgt caggttcctg
     1681 ggatgagcag atggagtgtt ctaagattgt gcacagcagc cccagctctg atgggaagca
     1741 gaaaaccgtg taccagacgc tgccagccaa gctgctatgg aggaaatacc cactgccgga
     1801 gaacgcggag aacatgtact atttctcgga gctggccctg accctcaacg agcaggagga
     1861 gggcgtggcg cccaccgaca gccgcctgcg gccggaccag cggctgatgg agaggggccg
     1921 ctgggacgag gccaacaccg agaagcagcg cctggaggag aagcagcgcc tgaaccggcg
     1981 acggcggctg gagtcgtgca cggccggctg tggcggggag gaagagaagg agtcagatgg
     2041 ctattcgccg ctgtggttcg agaagaggct ggacccgctg accggggaga tggcctgcat
     2101 atacaagggc ggctactggg aggccaagga gaagaaggac tggcacatgt gccccaacat
     2161 cttctgagcc actcctgcgg aaaatacagg cacctgcact gcctgtcaga cttttcttta
     2221 atgcacccga tttaatacag aacccaccaa tgcgtgtgtg cgcacgcgcg tgaccacacc
     2281 gcttaagaag gggtaagggc tgacctgggt tcttgccagc cccaggtcgc cgggtcacgt
     2341 gtgcccgttg ttatcattga cttgggcccc atgggcaccc tagttcccag ttaccacaac
     2401 tcaggccggc tggccgggcc atgggctgcc caggtcacta accccaaccc agggaggaaa
     2461 tatttccctc ctagggagcc tcttttgact tttttaagaa aaaaaaatat ccatttcttt
     2521 ccaacgatga ggtttagtaa atatttttag cacatcactt agaagactca ctttccaagt
     2581 gttcgttctt gccacagaac ggttctggca agaagcccgt ttttaaagac ctgaggaagc
     2641 caggcccctt tgaatgggga acacttcaaa cacagcccgg ctttctagct ggactgtcca
     2701 agctccagga gcgcaacacc cgcagagaca gcaggaagcc tggctggccg gcccagcatg
     2761 gcatgcagag cccgaagggg gaaggcagtc aaaggcagcc gccccccccc ccccgtgcca
     2821 ggccttggcc atggtggggc agtatcccag tcccaaagag gccaggaagg gctgaaaggc
     2881 agggccctta ggtgcttcct gcccaagaat caggccccca aatcagcaat aaggaacaaa
     2941 cccttccttt agcctgggct ggtgacccag gctcccaaca cctggcctcc cgccttgtcc
     3001 ttcggcggca tcagggtgcc tcactccgaa gtcctgacat ctttatttgc ctaatttata
     3061 tatatatatg atatacaaat atatatgaca tagctatttt gcttaaattt ctatgatacg
     3121 tgaaagtgaa aaatgatgaa gacagactgc ctgtctgagt ttggcctcct gccagccccg
     3181 ccctctcctt gtagccctcc cagtggcttc tgccaacctt agaaatgaaa cctgcccctc
     3241 agaccctctg cctccaaccc atctcacttc agtttgatct ggaaagttca ttgcagggcc
     3301 tttctttcta ctccaggcct ggttttgttt tttgttttgt tttttattaa aaaagaaaaa
     3361 gaaaacacca cgtatgaaat gccttacaat gcccactcta gagagggggt gggaagggcg
     3421 ggggagggaa ggtcactcgg tctccctcag agctggaatg taccccttcc cagcaggctg
     3481 agcaagcaag caccttctga tcataataaa aaccttggtt ctggagtttt ccaca
//
