LOCUS       XM_039092013            4132 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus oxysterol binding protein 2 (Osbp2),
            transcript variant X7, mRNA.
ACCESSION   XM_039092013
VERSION     XM_039092013.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092013.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4132
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4132
                     /gene="Osbp2"
                     /gene_synonym="RGD1309479"
                     /note="oxysterol binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     ESTs, 7 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 14 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:305475"
                     /db_xref="RGD:1310505"
     CDS             35..2764
                     /gene="Osbp2"
                     /gene_synonym="RGD1309479"
                     /codon_start=1
                     /product="oxysterol-binding protein 2 isoform X7"
                     /protein_id="XP_038947941.1"
                     /db_xref="GeneID:305475"
                     /db_xref="RGD:1310505"
                     /translation="MGKAAALSRGGGCAGRSRGLSSLFTVVPCLSCHTAAPGMNSSTL
                     GSGPAPKPQFQPVQAPERELLSEQVCQPISEPRSEPGSQTTFVPQPLGAGQESESLGL
                     WPGSGPNTKASPELPSPPRSTAESLPKPESKAGPKTQSVLRPGQSKTSAGSPVSGTSV
                     PMVSPPLDSYKGWLFKWTNYLKGYQRRWFVLGNGLLSYYRCIQDGITESPLGRNQGEM
                     AHTCRGTINLASAHFETEDSCGILLCNGARTYHLKASSEVDRQQWITVLELAKAKAIR
                     VMNTQSDDSGDDDEEPAAPADNSDLHHTLKTLSLKLDDLGTCNDLIAKHGAALQRSLN
                     ELDSLKIPSESGEKLKVVNERATLFRITSNAMINACKDFLELAEIHSRKWQRALNYEQ
                     EQRVHLEETIEQLAKQHNSLERAFCNTPGGPASSSKSFSEGSFLTSKGENSEEDEDTE
                     YFDAMEDSTSFITVITEAKEDRKPEGGPGTTSVDWTSADNVLDGASFMPKDSCKVKRR
                     VRIPDKPNYSLNLWSIMKNCIGRELSRIPMPVNFNEPLSMLQRLTEDLEYHHLLDKAV
                     NCTSSVEQMCLVAAFSVSSYSTTVHRIAKPFNPMLGETFELDRLEDMGLRSLCEQVSH
                     HPPSAAHHVFSKHGWSLWQEITIASKFRGKYISIMPLGAIHLEFQASGNHYVWRKSTS
                     TVHNIIVGKLWIDQSGDIEIVNHKTKDRCQLKFVPYSYFSKEAARKVTGVVSDSQGKA
                     HYVLSGSWDEQMECSKIVHSSPSSDGKQKTVYQTLPAKLLWRKYPLPENAENMYYFSE
                     LALTLNEQEEGVAPTDSRLRPDQRLMERGRWDEANTEKQRLEEKQRLNRRRRLESCTA
                     GCGGEEEKESDGYSPLWFEKRLDPLTGEMACIYKGGYWEAKEKKDWHMCPNIF"
ORIGIN      
        1 ctcggcgctc ggccgcgctc gggtccacag ctctatgggg aaagcggccg ctctaagccg
       61 aggcggcggc tgcgctggcc gctcccgcgg gctctcgtcg ctgttcacgg ttgtgccctg
      121 tctgtcctgc cacacggcgg cgccgggcat gaactcgtcc acgttgggct cagggccggc
      181 gccaaagcct caattccagc ctgtacaggc accagagcgg gagttgctgt cggaacaggt
      241 gtgtcagcca atttctgagc cgagatccga acctgggtcc cagacgacgt ttgtgccaca
      301 gcccttaggg gctgggcagg aatcggaatc actgggattg tggccggggt ctgggcccaa
      361 taccaaagct tcaccagagc tgccatcccc gccgcgatca acagcagaga gtttgcccaa
      421 acccgagtct aaggcggggc cgaagaccca gtctgttctg cgaccaggac agtcaaagac
      481 ttctgccggg agtccagtgt cagggactag tgtcccaatg gtctcaccac ctctggacag
      541 ctacaagggc tggctcttca agtggactaa ctacctgaag ggctaccagc gccgctggtt
      601 cgtgcttggc aatggcctgc tatcctacta caggtgcatt caggatggca ttactgagtc
      661 accacttggc agaaaccagg gtgaaatggc ccacacctgc cgtggaacca tcaacctggc
      721 ctccgcgcac ttcgaaacag aggactcttg tggaatcttg ctatgcaacg gggcaaggac
      781 ctaccacctc aaggccagct cagaggtgga ccgtcagcaa tggatcaccg ttctggagtt
      841 ggccaaggcc aaggctatcc gtgtgatgaa cactcagtca gatgactctg gggacgacga
      901 cgaagagcct gctgcccctg ctgacaacag tgatctccac cacactctta agaccctctc
      961 actgaagcta gacgacctcg gcacgtgcaa tgacctcatt gccaagcatg gcgctgccct
     1021 ccagcgctcc ctgaatgagc tggacagtct taagatccca tcagagagtg gggagaagct
     1081 gaaggttgtg aacgagcggg ccaccctctt ccgcatcaca tcaaatgcta tgatcaacgc
     1141 ctgtaaggac ttcctggaac tagcggagat tcacagccgg aaatggcagc gggctctgaa
     1201 ttatgagcag gagcaacgag tccacctgga ggaaaccatt gagcagttgg ccaagcagca
     1261 caacagtctt gaacgggcct tctgcaacac ccctggcggg ccagccagct ccagcaagag
     1321 cttcagcgag ggaagcttct tgacttccaa aggggagaac agtgaagaag atgaagatac
     1381 tgagtacttt gatgccatgg aagactccac atctttcatc accgtaatca ccgaggccaa
     1441 ggaagacaga aagcctgagg gtggacctgg gacgacctct gtggactgga cctcagcaga
     1501 taatgtatta gatggtgcct cattcatgcc caaggattca tgcaaagtga agaggcgagt
     1561 ccggatccct gacaaaccca actatagcct taacctctgg agcatcatga agaattgcat
     1621 tggccgagag ctctcccgga tccccatgcc ggtgaacttc aatgagcccc tgtccatgct
     1681 ccagcgactt acagaggacc tcgagtacca ccacctgctg gacaaggcgg tgaactgcac
     1741 cagctctgtg gagcagatgt gcctggtggc tgccttctcg gtgtcctcct actccaccac
     1801 cgtgcaccgc atcgccaagc ccttcaaccc gatgctgggg gagaccttcg agttggatcg
     1861 cctggaggac atgggcctgc gttctctctg cgagcaggtg agccatcacc ccccgtctgc
     1921 tgcccaccac gtgttctcta agcatggctg gagcctctgg caggagatca ccatcgccag
     1981 caagttccgg gggaaataca tctccatcat gccacttggt gccatccacc tcgaattcca
     2041 ggccagtggc aatcactacg tgtggaggaa gagtacctcc actgtgcaca acatcatcgt
     2101 gggcaagctc tggattgacc agtcagggga cattgagatt gtgaaccaca agaccaagga
     2161 ccggtgccag ctgaagttcg tgccctacag ctacttctcc aaagaggcag cccgaaaggt
     2221 gactggagtg gtgagcgaca gccagggcaa ggcccactac gtgctgtcag gttcctggga
     2281 tgagcagatg gagtgttcta agattgtgca cagcagcccc agctctgatg ggaagcagaa
     2341 aaccgtgtac cagacgctgc cagccaagct gctatggagg aaatacccac tgccggagaa
     2401 cgcggagaac atgtactatt tctcggagct ggccctgacc ctcaacgagc aggaggaggg
     2461 cgtggcgccc accgacagcc gcctgcggcc ggaccagcgg ctgatggaga ggggccgctg
     2521 ggacgaggcc aacaccgaga agcagcgcct ggaggagaag cagcgcctga accggcgacg
     2581 gcggctggag tcgtgcacgg ccggctgtgg cggggaggaa gagaaggagt cagatggcta
     2641 ttcgccgctg tggttcgaga agaggctgga cccgctgacc ggggagatgg cctgcatata
     2701 caagggcggc tactgggagg ccaaggagaa gaaggactgg cacatgtgcc ccaacatctt
     2761 ctgagccact cctgcggaaa atacaggcac ctgcactgcc tgtcagactt ttctttaatg
     2821 cacccgattt aatacagaac ccaccaatgc gtgtgtgcgc acgcgcgtga ccacaccgct
     2881 taagaagggg taagggctga cctgggttct tgccagcccc aggtcgccgg gtcacgtgtg
     2941 cccgttgtta tcattgactt gggccccatg ggcaccctag ttcccagtta ccacaactca
     3001 ggccggctgg ccgggccatg ggctgcccag gtcactaacc ccaacccagg gaggaaatat
     3061 ttccctccta gggagcctct tttgactttt ttaagaaaaa aaaatatcca tttctttcca
     3121 acgatgaggt ttagtaaata tttttagcac atcacttaga agactcactt tccaagtgtt
     3181 cgttcttgcc acagaacggt tctggcaaga agcccgtttt taaagacctg aggaagccag
     3241 gcccctttga atggggaaca cttcaaacac agcccggctt tctagctgga ctgtccaagc
     3301 tccaggagcg caacacccgc agagacagca ggaagcctgg ctggccggcc cagcatggca
     3361 tgcagagccc gaagggggaa ggcagtcaaa ggcagccgcc cccccccccc cgtgccaggc
     3421 cttggccatg gtggggcagt atcccagtcc caaagaggcc aggaagggct gaaaggcagg
     3481 gcccttaggt gcttcctgcc caagaatcag gcccccaaat cagcaataag gaacaaaccc
     3541 ttcctttagc ctgggctggt gacccaggct cccaacacct ggcctcccgc cttgtccttc
     3601 ggcggcatca gggtgcctca ctccgaagtc ctgacatctt tatttgccta atttatatat
     3661 atatatgata tacaaatata tatgacatag ctattttgct taaatttcta tgatacgtga
     3721 aagtgaaaaa tgatgaagac agactgcctg tctgagtttg gcctcctgcc agccccgccc
     3781 tctccttgta gccctcccag tggcttctgc caaccttaga aatgaaacct gcccctcaga
     3841 ccctctgcct ccaacccatc tcacttcagt ttgatctgga aagttcattg cagggccttt
     3901 ctttctactc caggcctggt tttgtttttt gttttgtttt ttattaaaaa agaaaaagaa
     3961 aacaccacgt atgaaatgcc ttacaatgcc cactctagag agggggtggg aagggcgggg
     4021 gagggaaggt cactcggtct ccctcagagc tggaatgtac cccttcccag caggctgagc
     4081 aagcaagcac cttctgatca taataaaaac cttggttctg gagttttcca ca
//
