LOCUS       NM_001000292             939 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 9 subfamily G member 4B
            (Or9g4b), mRNA.
ACCESSION   NM_001000292 XM_230075
VERSION     NM_001000292.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 939)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Aug 30, 2004 this sequence version replaced XM_230075.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000003.1  91249993-91250931
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..939
                     /gene="Or9g4b"
                     /gene_synonym="Olr458"
                     /note="olfactory receptor family 9 subfamily G member 4B"
                     /db_xref="GeneID:295728"
                     /db_xref="RGD:1333797"
     CDS             1..939
                     /gene="Or9g4b"
                     /gene_synonym="Olr458"
                     /note="olfactory receptor gene Olr458; olfactory receptor
                     458"
                     /codon_start=1
                     /product="olfactory receptor Olr458"
                     /protein_id="NP_001000292.1"
                     /db_xref="GeneID:295728"
                     /db_xref="RGD:1333797"
                     /translation="MEVDNRTILTEFILVGFSADPHWQLILFGIFLTIYLMTLSGNMT
                     LIILIRIDSRLHTPMYFFIGGLSFLDFWYNSVYIPKILVNCVSDDKRISLAGCGTQFF
                     FSCVAAYTECYLLAAMAYDRHAAICSPLLYSSIMSTSLCTGLVAGSYVGGILNAIAHT
                     ANTFRLRFCGKNIIDHFFCDVLPLVKMSCTDTHVYVKILSSMVGFTVLSSILAIIISY
                     FNILLAILRIRSASGRRKAFSTCASHLVSVTLFYGSLLFMYSRPSSNYSLERDKVAAM
                     FYTIINPFLNPFIYSLRNKDVKEAFKKLMQRIQQQT"
     exon            1..939
                     /gene="Or9g4b"
                     /gene_synonym="Olr458"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggaggtgg acaatcggac catcctgact gaatttatcc tcgtgggctt ctcagcagac
       61 ccccactggc agctgattct atttggaata tttctaacca tctacttgat gaccttgtca
      121 gggaacatga ccttgattat tttaatccgg attgattcta ggctgcatac acccatgtac
      181 ttttttattg gaggactatc ttttttggac ttctggtata attctgtgta cattcctaaa
      241 atcttggtca attgtgtttc agatgataag cgtatttctt tggctggttg tgggactcag
      301 tttttctttt cttgtgtagc agcctacact gagtgctacc tactggcagc catggcatat
      361 gatcgacatg ctgcaatttg tagtccattg ctctattcaa gcatcatgtc cacgtctctc
      421 tgtactggcc tagtggctgg ctcctatgta ggagggattt tgaatgccat agcccatact
      481 gccaacactt tcaggttaag gttctgtggt aaaaatatta ttgatcactt tttctgtgat
      541 gtgcttccat tggtaaaaat gtcctgtaca gatacccatg tctatgtgaa aatcctctcc
      601 agtatggtgg gcttcactgt gctctccagc attcttgcca tcattatttc gtatttcaac
      661 atcttgctgg ctatcttgag gatccgctct gcctcaggaa gacgcaaggc tttctccacc
      721 tgtgcctctc acctggtctc tgtcacactc ttctatggct ccttgctttt catgtattca
      781 agacccagtt ccaattattc cctggaaaga gacaaagtgg cagccatgtt ctataccatt
      841 atcaatccat ttctcaaccc tttcatctat agcctgagaa acaaagatgt taaagaagcc
      901 tttaaaaagt tgatgcagag aatacaacag caaacatga
//
