LOCUS       NM_001000854             945 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 9 subfamily A member 4
            (Or9a4), mRNA.
ACCESSION   NM_001000854
VERSION     NM_001000854.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000004.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-945               JAXUCZ010000004.1  70368300-70369244
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q23"
     gene            1..945
                     /gene="Or9a4"
                     /gene_synonym="Olr799"
                     /note="olfactory receptor family 9 subfamily A member 4"
                     /db_xref="GeneID:405144"
                     /db_xref="RGD:1332737"
     CDS             1..945
                     /gene="Or9a4"
                     /gene_synonym="Olr799"
                     /note="olfactory receptor gene Olr799; olfactory receptor
                     799"
                     /codon_start=1
                     /product="olfactory receptor Olr799"
                     /protein_id="NP_001000854.1"
                     /db_xref="GeneID:405144"
                     /db_xref="RGD:1332737"
                     /translation="MFGNHTSATKFYLVGFPGSEKLHHILFATFCFFYLVTLVGNTVI
                     IVIVCVDKRLQSPMYFFLVHLSILEILVTTVIVPVMLWGLLLPGIQVISLAGCVAQLF
                     LQLALGTTEFSLLGAMAVDRYVAVCNPLRYSVIMNSRTCNSVVIVSWVFGFLYQIWPV
                     YATFHLNYCKSNVLDNFFCDRGQLLKLSCNNTIFIEFILFLMAVFVLFGSLIPTIVSY
                     TYIIATILKIPSASGRRKAFSTCASHFTCVVIGYGCCLFLYVKPKQTQAADYNRVVSL
                     MISIVTPFLNPFIFTLRNDKVIEALRDGVNRCYHLFKS"
     exon            1..945
                     /gene="Or9a4"
                     /gene_synonym="Olr799"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgttcggga atcacactag tgctactaaa ttttatcttg ttggctttcc tggctctgaa
       61 aaactacacc acatcctgtt tgctaccttc tgcttcttct acttagtcac actagtggga
      121 aacacagtca tcattgtgat tgtctgtgtt gataaacgtc tgcagtcccc catgtatttc
      181 ttccttgttc acctctccat cctggagatc ttggtcacaa ctgttattgt gccggtgatg
      241 ctttgggggc tgctactccc tggaatacaa gttatatctt tggctgggtg tgttgcccaa
      301 ctttttctgc aacttgctct ggggaccaca gagttttctt tgcttggagc tatggctgtg
      361 gatcgttatg tagctgtctg caaccctttg aggtacagtg tcatcatgaa cagtcgcacc
      421 tgcaactctg tggtaatcgt gtcttgggta tttggcttcc tttatcaaat ctggccggtg
      481 tatgccacat ttcaccttaa ctactgcaaa tcaaatgtgt tggacaattt cttctgtgac
      541 cgagggcagt tgctcaaatt atcctgcaat aatactattt tcatagagtt tatcctcttt
      601 ttaatggcag tctttgttct ttttggttct ttgatcccca caattgtgtc ctacacctat
      661 atcattgcca ccatcctcaa gatcccctca gcctcgggcc ggaggaaagc cttctccacc
      721 tgtgcctccc acttcacctg cgttgtcatt ggctacggct gctgcttgtt cctctatgtg
      781 aaacccaagc agacccaggc agccgactat aatagggtag tttccttgat gatttcgatc
      841 gtaactcctt tcctcaaccc tttcatcttc acactccgta atgacaaagt catagaagcc
      901 cttcgtgatg gagtgaaccg ttgctaccac ttattcaaga gctag
//
