LOCUS       NM_001000310             948 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 8 subfamily J member 3B
            (Or8j3b), mRNA.
ACCESSION   NM_001000310 XM_230106
VERSION     NM_001000310.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 948)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 948)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Aug 30, 2004 this sequence version replaced XM_230106.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-948               JAXUCZ010000003.1  91752966-91753913   c
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..948
                     /gene="Or8j3b"
                     /gene_synonym="Olr495"
                     /note="olfactory receptor family 8 subfamily J member 3B"
                     /db_xref="GeneID:295759"
                     /db_xref="RGD:1333916"
     CDS             1..948
                     /gene="Or8j3b"
                     /gene_synonym="Olr495"
                     /note="olfactory receptor gene Olr495; olfactory receptor
                     8J3-like; olfactory receptor 495"
                     /codon_start=1
                     /product="olfactory receptor Olr495"
                     /protein_id="NP_001000310.1"
                     /db_xref="GeneID:295759"
                     /db_xref="RGD:1333916"
                     /translation="MAPGNLTHVTEFILMGVSDRPELQVPLFFLFLVIYLLTAAGNLG
                     IITLTTVDSRLQTPMYFFLRHLAVINFGNSTVIAPKMLVNFLVTEKTTLYYECATQLG
                     GFLVFIVAEIFMLAVMAYDRYVAICNPLLYMVVVSRRVCLLLVFFTYLFSFVTAIVVT
                     PCVFSVSYCSSNVINHFYCDNVPLLALSCSDTHLPETVVFFFSATNLFFSMIIVLISY
                     FNIILAILRIRSSEGRKKAFSTCASHMMAVTVFYGTLLFMYLQPRTNHSLDTDKMASV
                     FYTLVIPMLNPVIYSFRNKDVKCALKEFLKNPCKRFNLI"
     exon            1..948
                     /gene="Or8j3b"
                     /gene_synonym="Olr495"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggctccag ggaatctcac tcatgtaaca gagtttatac tcatgggggt atctgaccgt
       61 ccggaacttc aggtaccact tttctttctc ttcttggtca tttaccttct gacagctgca
      121 gggaacctgg gcatcatcac cctcaccact gtggactcac gactgcaaac acccatgtac
      181 tttttcctca gacacttggc ggtcatcaac ttcggcaact caactgtcat tgctcctaaa
      241 atgctggtca acttcttagt cacagagaaa actaccttat attatgaatg tgccacgcag
      301 ctagggggat tcctcgtttt cattgtagca gagatcttca tgcttgctgt gatggcctat
      361 gaccgctatg tggccatctg caacccactg ctctatatgg tggtggtgtc tcgacgggtc
      421 tgccttctgc tggtgttttt cacatacctc tttagttttg tcacagccat tgttgtgaca
      481 ccttgtgtgt tctctgtttc ttattgctct tccaatgtaa tcaaccactt ttactgtgac
      541 aatgtcccat tattagctct gtcctgctcc gacactcacc ttccagaaac tgttgtattt
      601 tttttctcag caacaaacct gtttttctca atgatcattg ttctcatatc ctatttcaac
      661 ataatacttg caattttgag gatccgttca tctgaaggaa ggaagaaagc cttctccact
      721 tgtgcttccc acatgatggc tgtcactgtg ttctacggta cacttctctt catgtaccta
      781 caaccacgga ctaatcactc cttagacact gacaagatgg cctctgtgtt ctacacctta
      841 gtaataccaa tgttgaaccc tgtcatctat agctttagga acaaggatgt aaagtgtgca
      901 ttgaaagaat tcctaaaaaa tccatgcaaa cgattcaatc ttatataa
//
