LOCUS       NM_001000964             942 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 8 subfamily C member 9
            (Or8c9), mRNA.
ACCESSION   NM_001000964
VERSION     NM_001000964.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000008.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-942               JAXUCZ010000008.1  47319678-47320619
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q22"
     gene            1..942
                     /gene="Or8c9"
                     /gene_synonym="Olr1228"
                     /note="olfactory receptor family 8 subfamily C member 9"
                     /db_xref="GeneID:405316"
                     /db_xref="RGD:1334183"
     CDS             1..942
                     /gene="Or8c9"
                     /gene_synonym="Olr1228"
                     /note="olfactory receptor gene Olr1228; olfactory receptor
                     143-like; olfactory receptor 1228"
                     /codon_start=1
                     /product="olfactory receptor Olr1228"
                     /protein_id="NP_001000964.1"
                     /db_xref="GeneID:405316"
                     /db_xref="RGD:1334183"
                     /translation="MKKMATENDSSVSGFILMGLTDQPELQLPLFFLFLLNHTAIVVG
                     NLSLMSLIILNANLHTPMYFFLFNLSFIDFCYSFVFTPKMLMSFVSEKNIIPFSGCMT
                     QLFFFCFFAHSESYVLTVMAYDRYVAICKPLLYKAIMLPKICCLLMFVSYLIGFSSAS
                     VLAGLMIRLNFCNNKIINHYMCDIFPVLRISCSNTYVNELVSTAVVGTAIILCSLIIL
                     VSYAMILFNILHMSSGKGWSKALGTCGSHIITVSFFYGSGLLAYVKPSSAETVGQGKF
                     FSVFYTFLVPMLNPLIYSLRNKDVKVAVKRTLKRTTC"
     exon            1..942
                     /gene="Or8c9"
                     /gene_synonym="Olr1228"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagaaaa tggctacaga aaatgactct tcagtgtctg ggtttattct tatgggactg
       61 acagaccaac ctgaacttca gttgcccctc tttttcctat tcttgctgaa ccatactgct
      121 atagtggtgg gtaatttgag cttaatgagt cttatcatct taaatgcaaa tctccacact
      181 cctatgtact ttttcctttt caacctgtcc ttcattgatt tttgttattc atttgttttt
      241 acccccaaaa tgctgatgag ttttgtttca gagaagaata ttatcccttt ttcaggatgc
      301 atgactcagt tgtttttctt ctgttttttt gcccattctg agagttatgt gctgacagtc
      361 atggcttatg atcgctatgt ggccatctgt aagcctttac tgtacaaggc tatcatgtta
      421 cctaagatct gttgtttgct gatgtttgta tcatatttga tagggttttc tagtgcctcg
      481 gtccttgctg gcttaatgat taggcttaac ttttgtaata acaaaatcat caatcactac
      541 atgtgtgaca tcttccctgt ccttcggatc tcttgcagta acacctatgt caatgagctt
      601 gtgagtactg ctgtagtggg tacagctatc attttatgta gtctcattat cttggtctca
      661 tatgctatga tccttttcaa tatccttcat atgtcatcag gtaagggttg gtccaaagcc
      721 ttgggcactt gtgggtctca tattataact gttagtttct tctatggatc tgggctcctt
      781 gcttatgtca agccatcatc tgctgagact gtaggtcagg gaaaattttt ttcagtattt
      841 tacacatttt tggttcccat gttgaatcct ctcatttaca gcctcaggaa caaggatgtc
      901 aaagttgctg tgaagagaac cttaaagaga accacatgtt aa
//
