LOCUS       NM_001001083             984 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 8 subfamily C member 17
            (Or8c17), mRNA.
ACCESSION   NM_001001083
VERSION     NM_001001083.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 984)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 984)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000008.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR22582416.941437.1,
                                        SRR22582424.1449989.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-984               JAXUCZ010000008.1  47290030-47291013
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q22"
     gene            1..984
                     /gene="Or8c17"
                     /gene_synonym="Olr1225"
                     /note="olfactory receptor family 8 subfamily C member 17"
                     /db_xref="GeneID:405974"
                     /db_xref="RGD:1333819"
     CDS             1..984
                     /gene="Or8c17"
                     /gene_synonym="Olr1225"
                     /note="olfactory receptor gene Olr1225; olfactory receptor
                     143-like; olfactory receptor 1225"
                     /codon_start=1
                     /product="olfactory receptor Olr1225"
                     /protein_id="NP_001001083.1"
                     /db_xref="GeneID:405974"
                     /db_xref="RGD:1333819"
                     /translation="MHMTMENGSSVSEFILMGLTDQPELQLPLFVLFLVNYTATVMGN
                     LCLMNLICLNSNLHTPMYFFIFNLSFIDLCYSMVFTPKMLMSFVLEKNTISFRGCMTQ
                     LFFFLFFVNSESYVLTAMAYDRYVAICKPLLYKVVMSPGICCLLIFGTYLMGFVSALF
                     HTGFMIRLNFCDSNIINHYMCDIFPLLRLSCSSTYVNELVSSAVVGTAIILCCLIILI
                     SYAMILFNIIHMSSGKGWSKALGTCGSHIITVSLFYVTGLLAYVKPSSAETVGQGKFF
                     SVFYTFLVPMLNPLIYSLRNKDVKLAVKKNLEETHILVYPLISFLASSNPV"
     exon            1..984
                     /gene="Or8c17"
                     /gene_synonym="Olr1225"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgcacatga ctatggaaaa tggttcctct gtgtctgagt ttattcttat gggactgaca
       61 gaccagcctg agctccagtt gcccttattt gttctgttcc tggtgaacta cacagccact
      121 gtgatgggaa acttgtgctt aatgaatctc atttgcctaa actcaaatct tcacactccc
      181 atgtactttt tcatcttcaa tctgtccttc attgatctct gttattcaat ggtctttact
      241 cccaaaatgc tgatgagttt tgttttggag aagaacacca tctccttcag aggatgcatg
      301 actcagctgt ttttcttctt attttttgtg aactctgaga gttatgtgct gacagcgatg
      361 gcctatgatc gctatgtggc catctgtaag ccactgctct acaaagttgt tatgtcacct
      421 gggatctgct gtctgttgat atttggtact tacttgatgg ggtttgttag tgccttgttc
      481 cacacaggtt ttatgataag gctcaacttt tgtgattcta acatcatcaa ccactacatg
      541 tgtgacatct tccctctcct tcggctctct tgcagtagca cctatgtcaa tgagcttgtg
      601 agctctgctg tggtgggtac agctatcatt ttatgctgcc tcattatctt aatctcttat
      661 gctatgatcc tcttcaatat cattcatatg tcatcaggta agggttggtc caaagccttg
      721 ggcacttgtg ggtctcacat cataactgtt agtctcttct atgtaactgg gctgcttgct
      781 tatgtcaagc catcatctgc tgagactgtg ggccagggaa aatttttctc ggtattttac
      841 acctttttgg tgcccatgct gaatcctctt atttacagcc ttagaaacaa ggatgtcaaa
      901 cttgctgtga aaaaaaacct ggaagagact cacatattag tttacccatt gatatctttc
      961 ctagcctcat caaatccagt ttga
//
