LOCUS       NM_001000814             942 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 8 subfamily C member
            16C (Or8c16c), mRNA.
ACCESSION   NM_001000814 XM_003754591
VERSION     NM_001000814.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Jul 7, 2012 this sequence version replaced XM_003754591.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-942               JAXUCZ010000008.1  47217398-47218339
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q22"
     gene            1..942
                     /gene="Or8c16c"
                     /gene_synonym="Olr1220"
                     /note="olfactory receptor family 8 subfamily C member 16C"
                     /db_xref="GeneID:405100"
                     /db_xref="RGD:1333214"
     CDS             1..942
                     /gene="Or8c16c"
                     /gene_synonym="Olr1220"
                     /note="olfactory receptor gene Olr1220; olfactory receptor
                     143-like; olfactory receptor 1220"
                     /codon_start=1
                     /product="olfactory receptor Olr1220"
                     /protein_id="NP_001000814.1"
                     /db_xref="GeneID:405100"
                     /db_xref="RGD:1333214"
                     /translation="MKQMIMENDSSVSEFILMGLADQPELQLPLFFLFLMNYTATVMG
                     NLSLMSIIFLNSNLHTPVYFFIFNLSFIDFCYSFVFTPKMLMSFVLEKNTISFRGCMT
                     QLFFFCFFVNSESSVLTAMAYDRYVAICQPLMYKVVMSPGICFMLMFGSYLMGFAGAM
                     AHTGCMIRLSFCDSNIINHYMCDIFPLLQLSCSSIYVNELVSFVVVGTVITLSSLIIL
                     ISYGMILYNIIHISSGKGWSKAMGTCGSHIITVSLFYGSGLLAYVKPSSAETVGQGKI
                     FSVFYTFLVSMLNPLIYSLRNKDVKIAMKRTMKRLNK"
     exon            1..942
                     /gene="Or8c16c"
                     /gene_synonym="Olr1220"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagcaaa tgattatgga aaatgattct tctgtgtctg agtttattct tatgggactg
       61 gcagaccaac ctgagctcca gctcccacta ttttttctct tcttgatgaa ctacacagcc
      121 actgtgatgg gtaacttgag cttaatgagt atcattttct tgaattcaaa ccttcacact
      181 cccgtgtact ttttcatctt caatctgtcc ttcattgatt tttgttattc atttgttttt
      241 acccccaaaa tgctaatgag ttttgtttta gagaaaaaca ccatctcctt cagaggatgc
      301 atgactcagc tgttcttctt ctgctttttt gtgaactctg agagttctgt gctgacagcc
      361 atggcctatg atcgctatgt ggccatctgt cagccactta tgtacaaggt tgttatgtca
      421 cctggaatat gttttatgct gatgtttggg tcttacttga tggggtttgc tggggccatg
      481 gctcacacag ggtgtatgat caggctcagc ttttgtgact ctaacatcat caaccactac
      541 atgtgtgaca tcttccctct cctccagctc tcctgcagta gcatctacgt aaatgaactt
      601 gtgagctttg tagtggtggg tacggttatc actttatcta gcctaattat cttaatctct
      661 tatggtatga tcctttacaa tatcattcat atatcatcag gtaagggttg gtccaaagct
      721 atgggaacct gtgggtccca catcataact gttagtctct tttatggatc tgggctgctt
      781 gcttatgtca agccatcttc tgctgagact gtgggccagg ggaaaatttt ctcagtgttt
      841 tatacattct tggtttccat gctgaatcct cttatttaca gcctcaggaa caaggatgtc
      901 aagattgcca tgaagagaac catgaagaga ctcaacaaat ga
//
