LOCUS       NM_001000965             954 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 8 subfamily C member 13
            (Or8c13), mRNA.
ACCESSION   NM_001000965
VERSION     NM_001000965.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 954)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000008.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-954               JAXUCZ010000008.1  47212478-47213431
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q22"
     gene            1..954
                     /gene="Or8c13"
                     /gene_synonym="Olr1219"
                     /note="olfactory receptor family 8 subfamily C member 13"
                     /db_xref="GeneID:405318"
                     /db_xref="RGD:1332662"
     CDS             1..954
                     /gene="Or8c13"
                     /gene_synonym="Olr1219"
                     /note="olfactory receptor gene Olr1219; olfactory receptor
                     143-like; olfactory receptor 1219"
                     /codon_start=1
                     /product="olfactory receptor Olr1219"
                     /protein_id="NP_001000965.1"
                     /db_xref="GeneID:405318"
                     /db_xref="RGD:1332662"
                     /translation="MAMGNDSSVTEFILTGLTNQPELQLPLFFLFLVNYITTVVGNLS
                     LMSLICWNSNLQTPMYFFLFNLSFIDLCYSFVFTPKTLMSFVLEKNVISFTGCMTQLF
                     FICLFVNSECYLLTAMAYDRYVAICQPLLYMVIMSPVTCSLMMFGSYVMGFVAAIVHT
                     GFMIRLSFCDSNIINHYMCDIFPLLQLSCSSTYANELVCSVFVSTVVLASSFLILTSY
                     ALILFNIIQLSSGKGLCKAMSTCSSHIMTVVLFYGFGMLTHIKTSSDESVNQGKFFCL
                     LCTFLMPLLNPFIYSLRNKDVKLALKRTLRRLTVSEPLGLP"
     exon            1..954
                     /gene="Or8c13"
                     /gene_synonym="Olr1219"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggctatgg ggaatgactc ttctgtgact gagttcattc tcacaggact gacaaaccaa
       61 cctgaactcc agctgcccct gtttttcctg ttcctggtga actatataac cactgtggta
      121 ggaaacttga gtttaatgag tctcatttgc tggaattcaa accttcagac acctatgtac
      181 ttttttctct ttaacctctc ttttattgat ctatgttatt catttgtctt tactcccaaa
      241 acactaatga gttttgtctt agagaaaaat gtaatttctt ttacaggatg catgacgcag
      301 ctgtttttca tatgcctttt tgtcaattct gagtgctatt tgctgacagc catggcttac
      361 gatcgctatg ttgccatctg tcaacccctg ctgtacatgg tcatcatgtc tcctgtgaca
      421 tgttccctga tgatgtttgg ttcatatgtg atggggtttg ttgctgcaat tgtccataca
      481 ggttttatga tcaggctcag cttttgtgat tcgaacatta tcaaccacta catgtgtgac
      541 atcttccctc ttctccagct ctcctgcagc agcacctacg ctaatgagct tgtgtgttct
      601 gtttttgtca gcacagtagt ccttgcatct agctttctca tcttaacctc ctatgctttg
      661 attcttttta atatcattca gttgtcatca ggtaagggtt tatgcaaagc catgagtacc
      721 tgcagttctc acataatgac tgttgtccta ttttatggat ttggtatgct tacccatatc
      781 aaaacatcat ctgatgaatc agtgaatcaa gggaaatttt tctgcctact ttgtacattt
      841 ttgatgcctt tgctgaaccc ctttatttac agtctcagaa ataaggatgt caagcttgcg
      901 ctgaagagaa cactgaggag actcacagtg agtgaaccac tggggctacc atag
//
