LOCUS       NM_001000812             936 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 8 subfamily B member 42
            (Or8b42), mRNA.
ACCESSION   NM_001000812
VERSION     NM_001000812.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000008.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-936               JAXUCZ010000008.1  47430892-47431827
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q22"
     gene            1..936
                     /gene="Or8b42"
                     /gene_synonym="Olr1236"
                     /note="olfactory receptor family 8 subfamily B member 42"
                     /db_xref="GeneID:405098"
                     /db_xref="RGD:1333698"
     CDS             1..936
                     /gene="Or8b42"
                     /gene_synonym="Olr1236"
                     /note="olfactory receptor gene Olr1236; olfactory receptor
                     1236"
                     /codon_start=1
                     /product="olfactory receptor Olr1236"
                     /protein_id="NP_001000812.1"
                     /db_xref="GeneID:405098"
                     /db_xref="RGD:1333698"
                     /translation="MASANDSTRVKEFILLGLTQQPELQLPFFFLFLAIYVVSMVGNL
                     GLIVLIVLNPHLHTPMYYFLFNLSFIDFCYSSVITPKMLVSFVKQNIISYAECMTQLF
                     FFAFFVIDECCILTAMAYDRYVAICKPLLYKVSMSFQVCFLMTMSVYMMGFVGAIAHT
                     ICMLRLTFCNSNIINHYMCDIPPLLKLSCTSTSINDLVVFIVVGVNVIGPTLIIFTSY
                     TLIIFNISHIRSTAGRSKAISTCSSHIIAVSIFFGASAFMYLKPSPVGSEDEDKVSTV
                     FYTIVGPMLNPFIYSLRNKDVHIALHKTLKKSNLI"
     exon            1..936
                     /gene="Or8b42"
                     /gene_synonym="Olr1236"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggcctctg ccaatgactc aaccagagtg aaggagttta ttctgctggg cttgacacaa
       61 cagccagagc tccagctgcc tttctttttc ctcttcttgg caatctatgt ggtctctatg
      121 gtggggaacc tgggcttgat tgttctgatt gttttgaatc ctcacctgca cacccccatg
      181 tactactttc tcttcaacct ttccttcatt gatttctgct actcttctgt cataaccccc
      241 aaaatgctgg tgagttttgt gaagcagaac atcatctctt atgctgagtg catgactcag
      301 ctctttttct ttgccttctt tgttattgat gagtgttgta ttttgacagc gatggcctat
      361 gacagatatg tagccatatg taagcccctg ctttataagg tttccatgtc ctttcaggtc
      421 tgcttcctga tgacaatgag tgtgtacatg atggggtttg tgggtgccat agcccacaca
      481 atttgcatgc taagactcac cttctgtaat agcaacatca tcaatcatta catgtgtgac
      541 ataccccctc tcctaaagct ctcctgcaca agcacctcca tcaacgacct ggtggttttc
      601 attgttgtgg gtgtcaatgt gataggacct actttgatca tctttacttc ttatactttg
      661 atcattttca acatttccca tatccgttcc acagcgggca gatccaaggc tatcagtacc
      721 tgtagctccc acataatagc tgtttctatt ttctttggtg cctcagcatt catgtatctt
      781 aagccttctc ctgttggatc agaggatgaa gacaaagtat ccactgtttt ctacaccatt
      841 gtgggcccaa tgttgaatcc tttcatctac agtttgagga acaaggatgt tcacattgca
      901 ctgcataaga ctttgaagaa aagcaacctt atctag
//
