LOCUS       NM_001000813             951 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 8 subfamily B member 3C
            (Or8b3c), mRNA.
ACCESSION   NM_001000813
VERSION     NM_001000813.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 951)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000008.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-951               JAXUCZ010000008.1  47379226-47380176
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q22"
     gene            1..951
                     /gene="Or8b3c"
                     /gene_synonym="Olr1231"
                     /note="olfactory receptor family 8 subfamily B member 3C"
                     /db_xref="GeneID:405099"
                     /db_xref="RGD:1333520"
     CDS             1..951
                     /gene="Or8b3c"
                     /gene_synonym="Olr1231"
                     /note="olfactory receptor gene Olr1231; olfactory receptor
                     1231"
                     /codon_start=1
                     /product="olfactory receptor Olr1231"
                     /protein_id="NP_001000813.1"
                     /db_xref="GeneID:405099"
                     /db_xref="RGD:1333520"
                     /translation="MVSMRAGNGSFVTEFILAGLTDLPELQLPLFYLFLIIYIITVVG
                     NIGLITLISLNPHLHTPMYYFLFNLSFIDLSYSSVFSPKMLMNFVSEKNSISYEGCMT
                     QLFFFLFFVISECYMLTSMAYDRYVAICNPLLYKVSMSPQVCSILSFAAYGMGFAGAS
                     VHTGCMLRLTFCNANLINHYLCDILPLLQLSCTSTYVNEVVVLVVVGINITVPSCTIL
                     ISYVFILANILNIKSTQGRSKAFSNCSSHIMAISLFFGSAAFMYLKYSSGSMEHGKIS
                     SVFYTNVGPMLNPLIYSLRNKDVKVALRKSLIKFQRKDKF"
     exon            1..951
                     /gene="Or8b3c"
                     /gene_synonym="Olr1231"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggtaagca tgcgggcagg aaatggctcc tttgtgactg aatttattct tgctggtttg
       61 acagaccttc cagagctcca gctgcctctc ttttacctgt ttctaataat ctacataatc
      121 acagtggtgg gaaacattgg cttgatcacc ttgattagcc tcaatcctca cctgcacacc
      181 ccgatgtact atttcctctt caacctctcc ttcattgatc tcagctactc ttctgtcttc
      241 agccccaaaa tgctgatgaa ctttgtctct gagaagaatt ccatctccta tgaggggtgc
      301 atgactcagc tgtttttctt tctctttttt gtcatctctg aatgctatat gttgacctca
      361 atggcctatg atcgctatgt ggccatttgt aatccactgc tatataaggt ctcaatgtcc
      421 cctcaggtct gttctattct atcttttgct gcttatggga tggggtttgc tggagcctct
      481 gtccatacag gctgcatgct cagactgact ttctgtaatg ccaatctcat caaccattac
      541 ttgtgtgaca ttctccctct cctccaactt tcttgtacca gcacttatgt caacgaggtg
      601 gttgttcttg tagttgtggg tattaacatc acagtcccca gctgtacaat cctcatctcc
      661 tatgttttca tccttgccaa tattctaaac atcaaatcca cacaaggaag gtcaaaagcc
      721 ttcagtaact gtagctctca catcatggct atttctcttt tctttggatc agctgcattc
      781 atgtatctta aatattcttc tggatctatg gaacatggaa aaatatcttc agttttctac
      841 actaatgttg ggcccatgct caaccctctg atctacagtt tgaggaacaa agatgtcaag
      901 gtggcgttaa ggaaatcatt gattaagttt cagagaaaag acaaattcta a
//
