LOCUS       NM_001000487             945 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 6 subfamily C member 6H
            (Or6c6h), mRNA.
ACCESSION   NM_001000487 XM_229593
VERSION     NM_001000487.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Aug 30, 2004 this sequence version replaced XM_229593.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-945               JAXUCZ010000007.1  4471559-4472503     c
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..945
                     /gene="Or6c6h"
                     /gene_synonym="Olr962; ratchr7-5159547-5158603_ORF"
                     /note="olfactory receptor family 6 subfamily C member 6H"
                     /db_xref="GeneID:302045"
                     /db_xref="RGD:1332970"
     CDS             1..945
                     /gene="Or6c6h"
                     /gene_synonym="Olr962; ratchr7-5159547-5158603_ORF"
                     /note="olfactory receptor gene Olr962; olfactory receptor
                     962"
                     /codon_start=1
                     /product="olfactory receptor Olr962"
                     /protein_id="NP_001000487.1"
                     /db_xref="GeneID:302045"
                     /db_xref="RGD:1332970"
                     /translation="MKNQSMELDFILLGLTDDPGLQIVVFLFLFLNYMASLLGNLVIV
                     LLTLLDPCLKTPMYFFPRNFSFLEIMFTTVCIPRFLTTIVTGDKTISYNSCASQLFFY
                     LLLGVTEFYLLAAMSYDRYVAICRPLHYPIIMNSRVCHQLVLSSWVTGFLIIFPPVAM
                     GLKLDFCDSRVIDHFMCETSPILQISCTDTHVLEMMSFVLAVVTLVVTLVLVSLSYSF
                     IIKTTMNFPSAQQRTKAFSTCTSHMIVVSTMYGSCIFMYIKPSARERVTMSKNVALLY
                     TSIAPLLNPFIYTLRNRQVKEFFWDVLRKTMGFLNNKV"
     exon            1..945
                     /gene="Or6c6h"
                     /gene_synonym="Olr962; ratchr7-5159547-5158603_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaaaaatc agtcaatgga acttgacttc attcttttgg gattgacaga tgaccctgga
       61 ttgcaaattg tggtttttct gtttctcttt ctcaattaca tggccagcct cttggggaac
      121 ttagtcattg tgctcctcac tctgctggat ccttgcctta aaactccaat gtatttcttt
      181 cctcgtaatt tctcctttct ggaaatcatg ttcacaaccg tgtgtattcc cagattcttg
      241 acaaccattg tgactggaga caaaactatt tcctataata gttgtgcatc tcagttgttt
      301 ttctatcttt tgctgggagt tacagaattt tatctcttgg ctgccatgtc ctatgatcga
      361 tacgttgcca tctgcagacc attacattac cctatcatca tgaacagcag agtgtgtcat
      421 caacttgtcc tcagctcctg ggtgactggg ttcttgatca tctttccccc agtggcaatg
      481 ggtctaaagc tggatttctg tgattccagg gtaattgatc attttatgtg tgaaacttct
      541 cctattttgc agatctcctg cacagacact catgtcctag aaatgatgtc ctttgtctta
      601 gcagtggtga cactcgtagt tacactggta ctagtaagtc tctcttactc tttcatcatt
      661 aagactacta tgaatttccc ttctgcacag caaagaacca aagccttctc cacctgcact
      721 tcccacatga tcgttgtctc tacaatgtat ggtagttgca tcttcatgta tattaaacca
      781 tctgcaaggg agagagtgac catgtctaaa aatgtagctt tgctgtatac ttcaattgcc
      841 cctcttctga accccttcat ttatacacta agaaaccggc aggtgaaaga attcttctgg
      901 gatgtattgc gaaagactat gggcttttta aataacaaag tttaa
//
