LOCUS       NM_001001075             939 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 6 subfamily C member 3B
            (Or6c3b), mRNA.
ACCESSION   NM_001001075
VERSION     NM_001001075.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000007.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000007.1  6268619-6269557     c
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..939
                     /gene="Or6c3b"
                     /gene_synonym="Olr1022"
                     /note="olfactory receptor family 6 subfamily C member 3B"
                     /db_xref="GeneID:405965"
                     /db_xref="RGD:1333115"
     CDS             1..939
                     /gene="Or6c3b"
                     /gene_synonym="Olr1022"
                     /note="olfactory receptor gene Olr1022; olfactory receptor
                     1022"
                     /codon_start=1
                     /product="olfactory receptor Olr1022"
                     /protein_id="NP_001001075.1"
                     /db_xref="GeneID:405965"
                     /db_xref="RGD:1333115"
                     /translation="MKNYTIITEFVLLGISGNRKLQVVIFVFLLITYIVSIIGNLTII
                     MLTLLDSHLKTPMYYFLCNFSFLRNYFHQCFHSQILASIITQVKTISYNNCLAQLFFF
                     IFMGVTEIFLLTTMSFDRYVVICKPLHYTLIMNQKACTLFVLTSWLAGFLTIFPPLML
                     VLKLDFCASNVIDHFCCDYFPLLQLSCSDTWLLEVTGFYVALVSLLSTLALVILSYMC
                     IFRTILRIPSASQRKKAFSTCSSHMIVISMSYGSCIFIYVKPSANERASLTKTVAILS
                     TSVAPMLNPFIYTLRNHQVKQAFKDLVHKVGFYRNK"
     exon            1..939
                     /gene="Or6c3b"
                     /gene_synonym="Olr1022"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaaaaact acactataat tacagagttt gtgctattgg gaatatcagg caatagaaag
       61 cttcaggtag taatcttcgt ctttttatta ataacttaca tagtaagcat cattggaaac
      121 ctaaccatca taatgctcac attgctggac tctcacttaa agactcctat gtattatttc
      181 ctttgtaatt tctccttttt aagaaattat tttcaccagt gtttccattc ccagatttta
      241 gcatcaataa ttactcaagt caagaccatt tcctataata actgtttggc tcagttattt
      301 ttcttcatct tcatgggggt gacagaaatt tttcttctaa ccactatgtc tttcgatcgc
      361 tatgttgtca tctgcaagcc acttcactac accctcatca tgaatcagaa agcctgcacc
      421 ctttttgtcc tcacctcatg gctagcagga ttcctgacca tcttcccacc acttatgctg
      481 gtcctaaagt tggatttctg tgcttccaat gtcatcgacc atttctgctg tgactatttt
      541 ccccttttac agctgtcttg ctcagacacc tggctcctag aagtgactgg tttctatgtt
      601 gctctggttt ctctactgtc cacgttggca ttggtgattt tatcttacat gtgcattttc
      661 aggactattt taagaattcc atcagccagt cagagaaaaa aggctttctc cacctgttcc
      721 tctcacatga ttgtcatctc catgtcttat ggaagctgta tatttatcta tgtgaagcca
      781 tcagcaaatg aaagagcatc actcaccaaa acagtggcta ttctcagcac ttcagttgct
      841 cccatgttga acccttttat ttataccttg aggaaccacc aagtaaaaca agcttttaaa
      901 gacttggttc ataaggtagg gttttacaga aacaaatga
//
