LOCUS       NM_001000586             939 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 6 subfamily C member 38
            (Or6c38), mRNA.
ACCESSION   NM_001000586 XM_345772
VERSION     NM_001000586.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Aug 30, 2004 this sequence version replaced XM_345772.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000007.1  2156117-2157055     c
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..939
                     /gene="Or6c38"
                     /gene_synonym="Olr879"
                     /note="olfactory receptor family 6 subfamily C member 38"
                     /db_xref="GeneID:366793"
                     /db_xref="RGD:1334413"
     CDS             1..939
                     /gene="Or6c38"
                     /gene_synonym="Olr879"
                     /note="olfactory receptor gene Olr879; olfactory receptor
                     879"
                     /codon_start=1
                     /product="olfactory receptor Olr879"
                     /protein_id="NP_001000586.1"
                     /db_xref="GeneID:366793"
                     /db_xref="RGD:1334413"
                     /translation="MKNYTSITTFILVGLTDDANLQILLFIFLLLTYLLSVVGNLTII
                     TLTLVDSHLKTPMYFFLRNFSILEVSFTTVCIPRFLYTMASGDNTITYNACATQLFFV
                     IILGVTEFFLLTAMSYDRYVAICKPLHYTTIMNNRVCIQFLIGCYLMALIIVIPPFSM
                     SFKLEFCNSNVIDHFGCDAAPILKISCSNTEFIERFVLILAVLTLMFTLLCVVMSYTY
                     IIRTILRFPSAQKRKKAFSTCSSHIIVVSITYGSCIFIYIKPSAKEGVAVNKVVSVLT
                     TSVAPVMNPFIYTLRNKQVVQAFKDMIKKMASITKS"
     exon            1..939
                     /gene="Or6c38"
                     /gene_synonym="Olr879"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaaaaatt atacatcaat aactacattc atcctggtag gactaactga tgatgcaaat
       61 cttcaaattc tgcttttcat atttctgctc ttaacctatt tattgagtgt ggttggtaac
      121 ctgaccatca tcactctcac actggtggat tctcatctta aaacacctat gtattttttc
      181 ctcagaaatt tctccatttt ggaagtctca ttcacaactg tctgtattcc cagattcctc
      241 tacacaatgg catctgggga caataccatt acctataatg catgtgctac tcaactattt
      301 tttgttatta tcctgggtgt gactgagttt ttcctgctga ctgccatgtc ctatgaccgt
      361 tatgtggcca tctgcaagcc tctgcattac actaccatca tgaacaacag ggtctgcatc
      421 cagttcctta ttggctgtta tctaatggct ttaattattg tcatcccacc ttttagcatg
      481 agctttaagc ttgagttctg taactccaat gtcatagatc actttggctg tgacgctgct
      541 cccatcctga agatcagctg ctccaacact gagttcatag aacggtttgt cttgatcttg
      601 gctgtgctga cactcatgtt cacgttgttg tgtgtggtaa tgtcttacac atacattatc
      661 agaaccatcc tcagattccc atcagcccag aaaagaaaaa aggctttctc tacttgttct
      721 tctcatataa ttgtggtttc tatcacttac ggcagctgca ttttcatcta tattaaaccg
      781 tctgcaaaag aaggagtggc tgtaaataag gttgtgtctg tgctcacgac ttcagttgct
      841 ccagttatga atcctttcat ctacactctg aggaataagc aagtggttca agctttcaaa
      901 gacatgatca aaaagatggc ctctatcaca aagagctaa
//
