LOCUS       NM_001000587             954 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 6 subfamily C member
            202E (Or6c202e), mRNA.
ACCESSION   NM_001000587 XM_345775
VERSION     NM_001000587.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 954)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Aug 30, 2004 this sequence version replaced XM_345775.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-954               JAXUCZ010000007.1  3337291-3338244     c
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..954
                     /gene="Or6c202e"
                     /gene_synonym="Olr916"
                     /note="olfactory receptor family 6 subfamily C member
                     202E"
                     /db_xref="GeneID:366797"
                     /db_xref="RGD:1334322"
     CDS             1..954
                     /gene="Or6c202e"
                     /gene_synonym="Olr916"
                     /note="olfactory receptor gene Olr916; olfactory receptor
                     916"
                     /codon_start=1
                     /product="olfactory receptor Olr916"
                     /protein_id="NP_001000587.1"
                     /db_xref="GeneID:366797"
                     /db_xref="RGD:1334322"
                     /translation="MKNNTITTFILLGLTDDPQLQIPIFMFLFFAYTLSIAGNLTIIA
                     LTILDSHLKMPMYFFLQNFSILEISFTSACIPRYLYNIATGDRSITYDICVIQVFFTD
                     VFGVTEFFLLAIMSYDRYVAICKPLHYVTIMNSKVCQTLVLCCWMAGLLIILPPLTLF
                     LNLRFCDSNVIDYFFCDASPILKISCSDTWLIEQLVIICALLTFILTLVCVTLSYVHI
                     VKTILRFPSVKQRKKAFSTCSSHMIVVSITYGSCIFIYINPSAKDSVTINKGVTVLMT
                     SIAPMLNPFIYTLRNKQVRQAFSDSFKKIVMISMKKKTDQI"
     exon            1..954
                     /gene="Or6c202e"
                     /gene_synonym="Olr916"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagaaca acacaataac caccttcatt ctgttgggac taacagatga tcctcaactt
       61 cagattccaa tatttatgtt tctatttttt gcctacacac tcagcatagc tgggaatctg
      121 acaatcatag ccctcactat attggactcc caccttaaaa tgcccatgta cttttttcta
      181 caaaatttct ccatattaga aatttctttt acatctgctt gtatccctcg atatttatat
      241 aatatagcaa caggagacag gtcaatcact tatgatattt gtgtcattca agtgttcttt
      301 actgatgttt ttggagtaac tgaatttttt cttctggcca taatgtccta tgatcgttat
      361 gtggccatct gcaaacccct gcattatgta accatcatga acagtaaggt gtgtcagaca
      421 ctcgttctct gctgctggat ggctggcttg ctcattatac tcccaccact tactctgttc
      481 ctaaacttga gattctgtga ctcaaatgtt attgattatt tcttctgcga tgcatctcct
      541 atcttgaaga tttcatgctc agacacttgg ctcatagagc agctggtgat tatttgtgca
      601 ctgctgacct tcattctgac ccttgtgtgt gttactctgt cctatgtaca tattgtcaag
      661 accattctaa gattcccctc tgtcaagcaa aggaaaaagg ccttttccac ctgttcttct
      721 cacatgattg tagtttccat cacctatgga agttgtattt tcatttacat caacccttcg
      781 gcaaaggatt cggtgactat caataaagga gtaacagttc tgatgacatc aattgctccc
      841 atgctgaatc cattcattta tactctaaga aataagcaag ttagacaagc cttcagtgat
      901 tccttcaaaa agattgtcat gatctcaatg aagaaaaaga ctgatcaaat atag
//
