LOCUS       NM_001000937             957 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 6 subfamily A member A1
            (Or6aa1), mRNA.
ACCESSION   NM_001000937
VERSION     NM_001000937.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 957)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-957               JAXUCZ010000001.1  149381501-149382457 c
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..957
                     /gene="Or6aa1"
                     /gene_synonym="Olr17"
                     /note="olfactory receptor family 6 subfamily A member A1"
                     /db_xref="GeneID:405261"
                     /db_xref="RGD:1333998"
     CDS             1..957
                     /gene="Or6aa1"
                     /gene_synonym="Olr17"
                     /note="olfactory receptor 6F1-like; olfactory receptor
                     gene Olr17; olfactory receptor 17"
                     /codon_start=1
                     /product="olfactory receptor Olr17"
                     /protein_id="NP_001000937.1"
                     /db_xref="GeneID:405261"
                     /db_xref="RGD:1333998"
                     /translation="MDVKNQTVTEFIFLGFPGSSSLQLPLFITFLTVYLLSLMGNTLI
                     IFLILMDSTLQTPMYIFLGNLSFLEIWYTTATVPKLLATCVTEVVTIPVTGCITQYYF
                     FFSLGATECILLAVMAYDRHVAVCRPLHYSLLMSVHICLRFAAASWIGGFIAPLLPTI
                     LISQLNFCGPQKINHFFCDSDPIFKLSCSDTFLVEALGYTCSSVVILSSFLLTMSSYG
                     NIVVTIIRLSSREARKKTFSTCASHLTVVTIYYGTIIFAYVRPPAKYNFTIGKVVSVF
                     YCVITPLVNPLIYTLRNKDVVKAFQKFLSQKRFLSGKTIHGV"
     exon            1..957
                     /gene="Or6aa1"
                     /gene_synonym="Olr17"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggatgtaa aaaaccaaac agtgaccgag tttatttttc taggatttcc aggctcctcc
       61 tcactacagc tcccattgtt tattactttt ctcactgtgt acttgctgtc tctcatgggg
      121 aacaccctca ttattttcct tattcttatg gattccacac tacagacacc catgtacatc
      181 ttcttaggaa acctgtcatt cctggagatc tggtacacta cagccactgt tcctaagttg
      241 ctggctacat gtgtcacaga ggttgtcacc attcctgtta caggctgcat cactcagtac
      301 tattttttct tctccctggg agcaactgag tgcatcttgc tggcagttat ggcttatgac
      361 cggcatgtgg ctgtatgccg tcctctacat tactcacttc tcatgagtgt tcacatttgc
      421 ctgaggtttg cagctgcatc atggattgga ggcttcattg cccctctgct acctaccata
      481 ctcatctctc agctaaattt ttgtggccca cagaaaatca accatttctt ttgtgactct
      541 gaccccatct ttaaactctc ctgctcagac acattcttgg tggaggcctt gggttatacg
      601 tgcagctctg tggtgattct cagttcattc cttctcacaa tgagctccta tggcaacatt
      661 gtggtcacaa taatcaggct gtcctctcgg gaagccagga agaaaacatt ctcaacctgt
      721 gcctcccatc tcacagtagt gaccatctac tatggcacca taatctttgc ctatgtccga
      781 cctccagcca agtacaactt tacaatcggc aaagtggtct cagtgttcta ctgtgtgatc
      841 actcctttag tcaaccctct catatatacc ttgagaaaca aagatgtggt gaaagctttc
      901 cagaaatttc tatctcaaaa gaggttttta tcgggcaaaa ccatacatgg agtttga
//
