LOCUS       NM_001000332             933 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily W member 20
            (Or5w20), mRNA.
ACCESSION   NM_001000332 XM_230175
VERSION     NM_001000332.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 933)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Aug 30, 2004 this sequence version replaced XM_230175.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-933               JAXUCZ010000003.1  93839323-93840255
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..933
                     /gene="Or5w20"
                     /gene_synonym="Olr598; ratchr3-71578697-71579629_ORF"
                     /note="olfactory receptor family 5 subfamily W member 20"
                     /db_xref="GeneID:295828"
                     /db_xref="RGD:1332937"
     CDS             1..933
                     /gene="Or5w20"
                     /gene_synonym="Olr598; ratchr3-71578697-71579629_ORF"
                     /note="olfactory receptor gene Olr598; olfactory receptor
                     5W2-like; olfactory receptor 598"
                     /codon_start=1
                     /product="olfactory receptor Olr598"
                     /protein_id="NP_001000332.1"
                     /db_xref="GeneID:295828"
                     /db_xref="RGD:1332937"
                     /translation="MEVGNCSATEFLLLGITNNPVIKVILFSTFLIVYLMILIENLGM
                     IILIKMNPQLHTPMYFFLSHLSFSDICYSTAVGPKMLVGLMTKSNAIPFIGCAVQFFI
                     FCIFTDAECVLLAVMAFDRYKAISNPLLYAVDMSGVVCYQLLAVVYLVGMVDALTHTT
                     LTFCLCFCRSNEINHFFCDVPPLLLLSCSDTEVNELVIFTLFGFIELSTISGVLISYC
                     YIISSVLKIRSTEGRFKAFSTCTSHLTAVAIFQGTMLFMYFRPSSAYSLDQDKMTSLF
                     YTLVIPLLNPLIYSLRNKDVKASVKKSLRNRISI"
     exon            1..933
                     /gene="Or5w20"
                     /gene_synonym="Olr598; ratchr3-71578697-71579629_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggaggttg ggaactgttc agccactgag tttcttctcc tggggattac caataaccct
       61 gtgataaagg tgattttatt ttccactttt ctaattgttt atctcatgat tcttattgaa
      121 aatcttggaa tgatcatttt gataaagatg aatccccaac ttcacacacc gatgtacttt
      181 ttcctcagcc acctctcttt ctcagacatc tgctattcta ctgcagttgg gcccaagatg
      241 ctggtgggcc ttatgaccaa gagcaatgca attccattta ttggctgtgc tgtgcagttc
      301 tttatcttct gcatttttac agatgctgag tgtgtgctgc tggcagtgat ggcttttgat
      361 cgatataagg ccatcagcaa ccctttgctg tatgcagtag atatgtccgg agtggtgtgc
      421 tatcagctcc tggctgtcgt ttatctggtt ggaatggtag acgctttgac acacacaaca
      481 ttgacatttt gcttgtgttt ctgtcggtcc aatgaaatca accatttttt ctgtgatgtc
      541 cctcctctcc tattattatc ttgctcagat acggaggtta atgaactagt catattcacc
      601 ctatttgggt ttattgagct gagcaccatc tctggagttt tgatctctta ctgttacatc
      661 atctcatcag tcttgaagat ccgctccact gagggcaggt tcaaagcatt ctccacctgt
      721 acctctcatc tgactgctgt tgcaattttc cagggaacaa tgcttttcat gtatttccgg
      781 ccaagttctg cttattccct ggatcaagac aagatgacct cattattcta tactcttgtg
      841 atacccttgc tcaacccact tatttacagc ctcaggaata aggatgttaa agccagtgta
      901 aaaaagtccc tgagaaatag aatttccatt taa
//
