LOCUS       NM_001000660             936 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily W member 16
            (Or5w16), mRNA.
ACCESSION   NM_001000660
VERSION     NM_001000660.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-936               JAXUCZ010000003.1  93694034-93694969
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..936
                     /gene="Or5w16"
                     /gene_synonym="Olfr1140; Olr586"
                     /note="olfactory receptor family 5 subfamily W member 16"
                     /db_xref="GeneID:404860"
                     /db_xref="RGD:1333092"
     CDS             1..936
                     /gene="Or5w16"
                     /gene_synonym="Olfr1140; Olr586"
                     /note="olfactory receptor gene Olr586; olfactory receptor
                     1140; olfactory receptor 586"
                     /codon_start=1
                     /product="olfactory receptor Olr586"
                     /protein_id="NP_001000660.1"
                     /db_xref="GeneID:404860"
                     /db_xref="RGD:1333092"
                     /translation="MDVRNCSSITEFILVGITNDPSMKVVLFVAFLLIYLIILVANIG
                     MIVLIKLDSQLRTPMYFFLCHLSFSDICYSTAVGPKMLVDLLTKCKSISFGGCALQFF
                     FTCIFIDAECVLLAVMAFDRYKAISNPLIYAVDMSSRFCYQLLAGVYILAMIDTLMHT
                     IMTFELCFCRSNKINHFFCDLPPILLLSCSDIYVNELAMFVFSGFVELCTISGLLVSY
                     CYIITSVLKISSDEGRFKAFSTCASHLTAVAIFQGTLFFMYFRPSSSYSLDQDKIASL
                     FYTLVIPMLNPIIYSLRNKDVKEALYKVRNKRLFK"
     exon            1..936
                     /gene="Or5w16"
                     /gene_synonym="Olfr1140; Olr586"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggatgtca gaaactgctc ctcaatcact gaatttattc tagtgggaat caccaatgac
       61 cccagcatga aagtggttct attcgttgct tttcttctca tctatctcat tattcttgtg
      121 gcaaatattg gaatgatcgt tttgattaaa ctggattccc agcttcgcac accgatgtac
      181 ttcttcctct gccacctgtc tttctcagac atctgttatt ccactgctgt tgggccaaag
      241 atgctagtag acctactgac caaatgcaaa tctatatctt ttgggggttg tgctttgcaa
      301 ttttttttca cctgtatctt tatagatgct gagtgtgtgc tgctggcagt gatggctttt
      361 gatcggtaca aggccatcag caatcccctg atatatgctg tagacatgtc cagtagattt
      421 tgttaccaac ttctggctgg agtttatata ttagcaatga tagatactct gatgcatact
      481 ataatgacct ttgagttatg tttctgtagg tcaaataaga ttaatcattt cttctgtgat
      541 cttccaccta tcttattatt atcttgctca gatatatatg tcaatgaatt agcaatgttt
      601 gtgttttctg ggtttgttga gttatgtact atttcaggac ttcttgtctc ttactgttac
      661 attatcacat cagtcttgaa gatcagctct gacgaaggca gattcaaagc attctccact
      721 tgtgcctccc atctgactgc agttgcaatt tttcagggaa ctctgttctt tatgtatttc
      781 cggccaagtt cttcatattc cttagatcaa gacaaaatag cctcattgtt ttataccctg
      841 gtgattccca tgctcaatcc tattatttac agcctgagaa acaaggatgt gaaagaagcc
      901 ctgtacaaag tgagaaataa aaggttgttt aaataa
//
