LOCUS       NM_001000317             993 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily T member 9
            (Or5t9), mRNA.
ACCESSION   NM_001000317 XM_230118
VERSION     NM_001000317.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 993)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Aug 30, 2004 this sequence version replaced XM_230118.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-993               JAXUCZ010000003.1  92143371-92144363
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..993
                     /gene="Or5t9"
                     /gene_synonym="Olr517"
                     /note="olfactory receptor family 5 subfamily T member 9"
                     /db_xref="GeneID:295771"
                     /db_xref="RGD:1333653"
     CDS             1..993
                     /gene="Or5t9"
                     /gene_synonym="Olr517"
                     /note="olfactory receptor gene Olr517; olfactory receptor
                     517"
                     /codon_start=1
                     /product="olfactory receptor Olr517"
                     /protein_id="NP_001000317.1"
                     /db_xref="GeneID:295771"
                     /db_xref="RGD:1333653"
                     /translation="MSRHPLGYSVQRIPVNNVTDITMFILTGFTDDADMQALLFILFF
                     VIYLFTLIGNLGLVLLVIGDSRLHNPMYYFLSVLSFLDACYSTVVTPKMLVNFLSKDK
                     SISYPGCVTEMFLFVTFGTTECFLLAAMAYDRYVAIYNPLLYAVKMSPTVYIPLIIAC
                     YSGGIMHATIHTVATFSLSFCASNEIRHVFCDIPPLLAISCSNTNINQLLLFYCVGVI
                     EIITILIVLVSYSFILFAILKMRSAEGRRKIFSTCGSHLTGVSIYHGTILFMYVRPSS
                     NYALEHDMIVSTFYTIVIPMLNPIIYSLRNKDVKEAMKKIFERNLFMNKVHLKF"
     exon            1..993
                     /gene="Or5t9"
                     /gene_synonym="Olr517"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtcaagac atccactagg ttacagtgta caaagaatcc cagtgaacaa tgtgacagac
       61 atcactatgt ttatattaac aggcttcact gatgatgctg acatgcaagc cttgttattt
      121 attttgtttt ttgtgatcta tctttttact cttataggca acttgggact tgttttacta
      181 gtcattggag attcccgcct tcacaatccc atgtactatt ttttaagcgt tctatcattt
      241 ctagatgcct gttattccac agttgtcact ccaaagatgt tggtcaattt tctttcaaaa
      301 gataaatcta tctcataccc tggttgtgta acagaaatgt ttctctttgt tacatttgga
      361 accacagaat gtttcctgtt ggcagcaatg gcttatgacc gctatgtagc tatctacaac
      421 ccacttctct atgcagtgaa aatgtcacct actgtctata tacctctcat catagcttgt
      481 tattcaggtg gaattatgca tgctactata cacacagtgg ctacctttag cctttctttc
      541 tgtgcatcca atgaaattag gcatgtcttc tgtgacattc ctccattgct ggctatttct
      601 tgttcaaaca ccaatataaa ccagcttctg ctcttctatt gtgtgggagt catcgaaatt
      661 attaccatcc tgattgtcct ggtttcttac agtttcatac tctttgcaat tcttaagatg
      721 cgttctgcag aagggaggag aaaaatcttt tctacatgtg gttctcacct tacaggagtg
      781 tcaatttatc atgggacaat tcttttcatg tatgtgagac ctagttctaa ctatgccttg
      841 gaacatgaca tgattgtgtc cacattttat actattgtga ttccaatgct aaatcccatc
      901 atctacagtc tgagaaacaa agatgtgaaa gaggcaatga aaaagatttt tgagagaaat
      961 ttgttcatga ataaagttca tcttaaattc taa
//
