LOCUS       NM_001000673             936 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily T member 16
            (Or5t16), mRNA.
ACCESSION   NM_001000673
VERSION     NM_001000673.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR22582416.1388751.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-936               JAXUCZ010000003.1  92553938-92554873   c
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..936
                     /gene="Or5t16"
                     /gene_synonym="Olr533"
                     /note="olfactory receptor family 5 subfamily T member 16"
                     /db_xref="GeneID:404876"
                     /db_xref="RGD:1334282"
     CDS             1..936
                     /gene="Or5t16"
                     /gene_synonym="Olr533"
                     /note="olfactory receptor gene Olr533; olfactory receptor
                     533"
                     /codon_start=1
                     /product="olfactory receptor Olr533"
                     /protein_id="NP_001000673.1"
                     /db_xref="GeneID:404876"
                     /db_xref="RGD:1334282"
                     /translation="MENVTYVSLFILRGLTGNTELQIILFFLFLMIYLFTLMGNIGLI
                     AVVIGNPQLHNPMYYFLGVLSFIDTCFSTIITPKMLIDFMSKKKVISFLGCTAQMFLA
                     VSCGTTECFLLAAMAYDRYVAIYNPLLYAVSMSPRVYVSLIIASNVGGILHASIHTAA
                     TASLSFCNSNEIKHFFCDIPPLLAISCSDTKMNELLLFVFVSSIEVLTILVIIISYSF
                     ILFAILKMHSAEGRQKVFSTCGSHLTGVSIYYGTILFMYMRPSSSYALEHDMVVSTFY
                     AIVIPMLNPIIYSLRNKEVKEAMKRLLGKVFMNVK"
     exon            1..936
                     /gene="Or5t16"
                     /gene_synonym="Olr533"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggagaatg tcacttatgt gtctctcttc attctgaggg gcctcacagg caacactgaa
       61 cttcagatca ttcttttttt cctatttcta atgatttatc tttttacact catgggaaac
      121 ataggactta ttgcagtagt cattgggaat cctcagctcc acaacccaat gtactatttt
      181 ctaggtgttt tatcattcat agacacttgc ttttctacca ttatcactcc caaaatgtta
      241 atagatttta tgtcaaagaa gaaagtcatt tcattccttg gatgtacagc acagatgttc
      301 cttgctgtta gctgtggaac aacagagtgt tttctcttgg ctgcaatggc ttatgaccgc
      361 tatgtagcta tttacaaccc acttctatat gcagtgagca tgtcacccag agtctatgtg
      421 tcactcatca ttgcctccaa tgttggtgga attcttcatg catctatcca tacagcagcc
      481 actgctagtc tctccttttg taactccaat gaaattaagc attttttctg tgatattcct
      541 cctctattgg ctatttcttg ctctgacact aaaatgaatg aacttctgct cttcgtcttt
      601 gtgagctcca ttgaggtact cactatcttg gtcatcatca tctcttacag tttcatcttg
      661 tttgccattt tgaagatgca ttctgctgag gggagacaaa aagtgttctc tacatgtggt
      721 tctcacctca ctggagtgtc catatattat ggaacaatcc tcttcatgta tatgagacca
      781 agttctagct atgccttgga acatgacatg gtagtgtcca cattttatgc cattgtgatt
      841 cccatgttga atcctatcat ctatagtctt aggaacaaag aggtaaagga ggcaatgaaa
      901 agacttttag gaaaagtgtt tatgaatgta aaataa
//
