LOCUS       NM_001000219             972 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily P member
            60C (Or5p60c), mRNA.
ACCESSION   NM_001000219 XM_219220
VERSION     NM_001000219.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 972)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 30, 2004 this sequence version replaced XM_219220.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR22582416.112991.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-972               JAXUCZ010000001.1  171491949-171492920 c
FEATURES             Location/Qualifiers
     source          1..972
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q33"
     gene            1..972
                     /gene="Or5p60c"
                     /gene_synonym="Olr252"
                     /note="olfactory receptor family 5 subfamily P member 60C"
                     /db_xref="GeneID:293398"
                     /db_xref="RGD:1333639"
     CDS             1..972
                     /gene="Or5p60c"
                     /gene_synonym="Olr252"
                     /note="olfactory receptor gene Olr252; olfactory receptor
                     252"
                     /codon_start=1
                     /product="olfactory receptor Olr252"
                     /protein_id="NP_001000219.1"
                     /db_xref="GeneID:293398"
                     /db_xref="RGD:1333639"
                     /translation="MALLKHGNNTAVTEFILLGLTDDKVLRVILFTIILCIYLVTVSG
                     NLSTILLIRVSSQLHHPMYFFLSHLGFADMGYSSSVTPNMLVNFLIKQNTISYLGCSI
                     QFGSAALFGGLECFLLAAMAYDRFVAICNPLLYSTKMSTQVCVQLVVGSYIGGFLNAS
                     SFTLSFFSLSFCGPNRINHFYCDFALLVELSCSDVSVPVAVTSFSAASVTMLTVFIIA
                     ISYTYILITILKMRSTEGRQKAFSTCTSHLTAVTLFYGTITFIYVMPKSSYSTDQNKV
                     VSVFYMVVIPMLNPLIYSLRSNEIKGALKKQLAKNMFSQNNILFCKT"
     exon            1..972
                     /gene="Or5p60c"
                     /gene_synonym="Olr252"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggctctcc tgaagcatgg aaacaacact gcagtaacag agttcatttt attgggatta
       61 acagatgata aagttcttag agtcatcctc ttcaccatca tcctgtgcat ctacctggta
      121 actgtgtctg ggaacctcag caccatcctt ctgatcagag tctcttccca gctccatcat
      181 ccaatgtact tttttcttag tcacttgggt tttgctgaca tgggctactc atcttctgtc
      241 acacccaata tgcttgtcaa cttccttata aagcaaaata ccatctccta ccttggatgt
      301 tctatacagt ttggctcagc tgctttgttt ggaggtcttg aatgcttcct tctggctgcc
      361 atggcttatg atcgttttgt agcaatctgc aacccactgc tttattcaac gaaaatgtcc
      421 acacaagtct gtgtccagtt ggttgtggga tcttatatag ggggatttct taatgcctcc
      481 tcttttaccc tttccttttt ttccttgtcc ttctgtggac caaatagaat caatcacttt
      541 tactgtgatt ttgctctgtt agtagaactt tcttgttctg atgtcagtgt tcctgtagct
      601 gttacctcat tttctgctgc ctcagttact atgctcacag tgtttatcat agccatctcc
      661 tatacctata tcctcatcac catcctgaag atgcgttcca ctgagggtcg acagaaagcc
      721 ttctctacct gcacttccca cctcactgca gtcactctgt tctatggaac catcacattc
      781 atctatgtga tgcccaagtc cagctactcc acagaccaga acaaggtggt gtctgtgttt
      841 tatatggtgg tgatccccat gttgaacccc ctcatctata gcctcaggag taatgagatt
      901 aagggtgctc tgaaaaaaca gcttgctaag aatatgtttt ctcagaacaa tatattgttt
      961 tgtaaaactt aa
//
