LOCUS       NM_001000209             939 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily P member 5B
            (Or5p5b), mRNA.
ACCESSION   NM_001000209 XM_219203
VERSION     NM_001000209.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 30, 2004 this sequence version replaced XM_219203.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000001.1  171147442-171148380
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q33"
     gene            1..939
                     /gene="Or5p5b"
                     /gene_synonym="Olr235"
                     /note="olfactory receptor family 5 subfamily P member 5B"
                     /db_xref="GeneID:293381"
                     /db_xref="RGD:1333421"
     CDS             1..939
                     /gene="Or5p5b"
                     /gene_synonym="Olr235"
                     /note="olfactory receptor gene Olr235; olfactory receptor
                     235"
                     /codon_start=1
                     /product="olfactory receptor Olr235"
                     /protein_id="NP_001000209.1"
                     /db_xref="GeneID:293381"
                     /db_xref="RGD:1333421"
                     /translation="MEPGNHTMVTEFIILGLTEDPTLCCIFFVLFLGVYLTTVLGNIC
                     IIILIRRSPQLRTPMYLFLSHLAFVDIGYSSSVTPVMIVNFLRERTAIPVTGCIVQLG
                     SDVVFGTAECFLLAAMAYDRYVAICSPLRYSTLMSSRVCFILLVISYAGGCVNSSSFT
                     SCLLSLTFCGPNKINHFFCDLPPLVELSCTHVYIADMSPAISAGSIIVITLFTIIISY
                     VYILRSILRMRSTEGRHKAFSTCTSHLTAVTLFYGTVTFVYVIPKSSHSPDQIKVVSV
                     FYTVVIPMLNPLIYSLRNKEVKEAMRKLMARTHSLF"
     exon            1..939
                     /gene="Or5p5b"
                     /gene_synonym="Olr235"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggagcctg gaaaccacac aatggtaaca gaattcatta ttttggggct aactgaggac
       61 cccacccttt gttgtatctt ctttgtgttg ttcctgggtg tctacctcac caccgtatta
      121 ggcaatatct gcataatcat attgatcaga agaagccctc agcttcgcac cccaatgtac
      181 ctcttcctca gccacttggc ctttgtggac attgggtact ccagctcagt cacacctgtc
      241 atgattgtta atttcctgag agagagaact gccatccctg tgactggctg catagtccag
      301 cttggctctg atgtggtctt tgggactgct gagtgcttcc tgctggccgc catggcctat
      361 gatcgctatg tggccatctg ctcacccctg cgctactcca ctctcatgtc ttccagggtc
      421 tgcttcatct tactggttat ttcctatgcg ggtggatgtg tcaactcttc atcattcact
      481 agctgtttgt tgagcctgac tttctgtgga ccaaataaaa tcaaccattt cttctgtgac
      541 ctcccaccac tggtggagct ttcctgtacc catgtttaca ttgctgatat gtctcctgcc
      601 atctcagcag gctccatcat cgtcatcact ctgttcacaa tcattatttc atatgtctac
      661 atccttcgct ccatcctcag gatgcgctct actgagggga ggcacaaggc cttctccacc
      721 tgcacctccc acctcactgc agtcaccctg ttttatggga cagttacatt tgtttatgtc
      781 ataccaaagt caagtcactc acccgaccaa attaaagtgg tgtctgtgtt ctacacagtg
      841 gtgataccca tgctgaatcc attgatctac agtctgagga ataaggaggt gaaagaggcc
      901 atgaggaaat tgatggcgag aacacattcc ttattttga
//
