LOCUS       NM_001000213             933 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily P member 56
            (Or5p56), mRNA.
ACCESSION   NM_001000213 XM_219209
VERSION     NM_001000213.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 933)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 30, 2004 this sequence version replaced XM_219209.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-933               JAXUCZ010000001.1  171253904-171254836
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q33"
     gene            1..933
                     /gene="Or5p56"
                     /gene_synonym="Olr242; ratchr1-165460424-165461356_ORF"
                     /note="olfactory receptor family 5 subfamily P member 56"
                     /db_xref="GeneID:293387"
                     /db_xref="RGD:1332645"
     CDS             1..933
                     /gene="Or5p56"
                     /gene_synonym="Olr242; ratchr1-165460424-165461356_ORF"
                     /note="olfactory receptor gene Olr242; olfactory receptor
                     242"
                     /codon_start=1
                     /product="olfactory receptor Olr242"
                     /protein_id="NP_001000213.1"
                     /db_xref="GeneID:293387"
                     /db_xref="RGD:1332645"
                     /translation="MEAQNHTTVTEFILLGLTENSTLRVILFMTFLGIYAVTVVGNFS
                     IISLIRNCPQLHTPMYLFLSHLAFVDIGFSTSITPIMLTGFLERTITLSVAACEAQFC
                     IAVTFGTVECFLLAAMAYDRYVAICSPLLYSTHMSPRICFLLVGASYVGGCVNSWTFT
                     SCLLSLSFCGPNQIDHFFCDFPAVLKLSCSDVSIIGMIPSISAGTIIVVTVFVIAVSY
                     TYILITILKMRSTEGRKKAFSTCTSHLTAVTLYYGTITFIYVMPKSNYSTEQNKILSV
                     FYTVVIPMLNPLIYSLRNRDVKEALRKAIIRIFP"
     exon            1..933
                     /gene="Or5p56"
                     /gene_synonym="Olr242; ratchr1-165460424-165461356_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggaggctc aaaaccacac cactgtgaca gagttcatcc ttttggggtt aacagagaat
       61 tccacactgc gtgtcatcct atttatgaca tttctaggga tatatgctgt tactgtagtg
      121 ggcaatttca gcatcatcag tttaataaga aactgccctc aactccacac acccatgtat
      181 ctgttcctta gccatctggc ttttgtggac attggctttt ccacatcaat cacacctata
      241 atgcttaccg gatttcttga acgtacaata acactctctg tggctgcttg tgaagcccaa
      301 ttctgcattg cagtgacatt tgggacggtt gagtgcttcc tcctagctgc catggcctat
      361 gaccgctatg tggccatctg ctcacccctg ctttattcaa cacatatgtc ccccaggatc
      421 tgcttccttt tagttggagc ttcctatgtg ggtggctgtg tgaattcatg gacatttact
      481 agttgtctgt tgagtctgtc cttctgtgga ccaaatcaga tagatcattt tttctgtgat
      541 ttccctgccg tgttgaaact ttcttgctca gatgtctcca ttattggaat gattccttct
      601 atctctgctg gaaccatcat tgtggtcaca gtgtttgtca tagctgtctc ctacacctac
      661 atcctcatca ccattctgaa gatgcgctcc actgagggcc gaaaaaaggc cttctccacc
      721 tgcacctctc atctcaccgc agtcacttta tactatggaa ctattacctt catttatgtg
      781 atgcccaagt caaactattc tactgaacag aacaagatac tgtctgtatt ctacacagta
      841 gtcattccca tgcttaaccc actcatctac agtctgagga acagagatgt aaaagaggct
      901 cttaggaagg ccatcatcag aatatttcca tag
//
