LOCUS       NM_001000211             939 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily P member 5
            (Or5p5), mRNA.
ACCESSION   NM_001000211 XM_219205
VERSION     NM_001000211.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 30, 2004 this sequence version replaced XM_219205.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000001.1  171171256-171172194 c
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q33"
     gene            1..939
                     /gene="Or5p5"
                     /gene_synonym="Olr239"
                     /note="olfactory receptor family 5 subfamily P member 5"
                     /db_xref="GeneID:293383"
                     /db_xref="RGD:1334219"
     CDS             1..939
                     /gene="Or5p5"
                     /gene_synonym="Olr239"
                     /note="olfactory receptor gene Olr239; olfactory receptor
                     239"
                     /codon_start=1
                     /product="olfactory receptor Olr239"
                     /protein_id="NP_001000211.1"
                     /db_xref="GeneID:293383"
                     /db_xref="RGD:1334219"
                     /translation="MKPGNHTMVTEFIILGLTEDPTLCCIFFVLFLGVYLTTVLGNAS
                     IIMLIRRSPQLHTPMYLFLSHLAFVDIGYSSSVTPVMIVNFLRERTAIPVAGCIVQLG
                     SDVVFGTAECFLLAAMAYDRYVAICSPLRYSTLMSSRVCFILLVISYAGGCVNSSSFT
                     SCLLSLTFCGPNKINHFFCDLPPLVELSCTHVYIADMSPAISAGSIIVITLFIIIISY
                     VYILRSILRMRSTEGRHKAFSTCTSHLTAVTLFYGTVTFVYVIPKSSHSPDQIKVVSV
                     FHTVVIPMLNPLTYSLRNKEVKEAMRKLMARTHSSY"
     exon            1..939
                     /gene="Or5p5"
                     /gene_synonym="Olr239"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagcctg gaaaccacac aatggtaaca gaattcatta ttttggggct aacggaggac
       61 cccacccttt gttgtatctt ctttgtgttg ttcctgggtg tctatctcac caccgtattg
      121 ggcaatgcca gcataattat gttgatcaga agaagccctc agcttcacac cccaatgtac
      181 ctcttcctca gccacttggc ctttgtggac attgggtact ccagctcagt cacacctgtc
      241 atgattgtga atttcctgag agagagaact gccatccctg tggctggctg catagtccag
      301 cttggctctg atgtggtctt tgggactgct gagtgcttcc tgctggccgc catggcctat
      361 gatcgctatg tggccatctg ctcacccctg cgctactcca ctctcatgtc ttccagggtc
      421 tgcttcatct tactggttat ttcctatgcg ggcggatgtg tcaactcttc ctcattcact
      481 agctgtttgt tgagcctgac tttctgtgga ccaaataaaa tcaaccattt cttctgtgac
      541 ctcccaccac tggtggagct ttcctgtacc catgtttaca ttgctgatat gtctcctgcc
      601 atctcagcag gctccatcat cgtcatcact ctgttcataa tcattatttc atatgtctac
      661 atccttcgct ccatcctcag gatgcgctct actgagggca ggcacaaggc cttctccacc
      721 tgcacctccc acctcactgc agtcaccctg ttttatggga cagttacatt tgtttatgtc
      781 ataccaaagt caagccactc acccgaccaa attaaagtgg tgtctgtgtt ccacacagtg
      841 gtgatcccca tgctgaatcc cttgacctac agtctgagga acaaggaagt gaaagaggcc
      901 atgaggaaat taatggcgag aacacattcc tcatattga
//
