LOCUS       NM_001000489             939 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily O member 1
            (Or5o1), mRNA.
ACCESSION   NM_001000489 XM_229136
VERSION     NM_001000489.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Aug 30, 2004 this sequence version replaced XM_229136.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000021.1  133891870-133892808 c
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq36"
     gene            1..939
                     /gene="Or5o1"
                     /gene_synonym="Olr1765; ratchrX-136309468-136308530_ORF"
                     /note="olfactory receptor family 5 subfamily O member 1"
                     /db_xref="GeneID:302821"
                     /db_xref="RGD:1334403"
     CDS             1..939
                     /gene="Or5o1"
                     /gene_synonym="Olr1765; ratchrX-136309468-136308530_ORF"
                     /note="olfactory receptor gene Olr1765; olfactory receptor
                     11A1-like; olfactory receptor 5B21-like; olfactory
                     receptor 1765"
                     /codon_start=1
                     /product="olfactory receptor Olr1765"
                     /protein_id="NP_001000489.1"
                     /db_xref="GeneID:302821"
                     /db_xref="RGD:1334403"
                     /translation="MSNLTAIKEFLLLGFGSLHGLQFFLFGTFLGIYIMTLLGNLLIL
                     TVTSSDHSLQTPMYFFLSNFSFLEIWYTTSIAPKMLKTLLSGPEAISFTGCVAQFYFF
                     GSMAVVECFLLAAMSYDRYLAICSPLRYPSLMNFHTCILLAGGSWVGGFLTPVVTVTM
                     TFQLQFCASNEIDHFFCDLAPVLKLACSDPEEVKKTTFLMASFVTMVPFLLTVTSYIN
                     IVVAVLRMSSAAGKQRAFSTCSSHLTVVSLYYGTLGTVYAIPTATQATVLNKVFSLLY
                     TVVTPMVNPIVYSLRNKDVKKAVQKLLSKWEYPMKT"
     exon            1..939
                     /gene="Or5o1"
                     /gene_synonym="Olr1765; ratchrX-136309468-136308530_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgagtaatc tgactgcaat caaagaattt ctccttctgg gattcggaag cctccatggg
       61 ttacagtttt tcctttttgg aacatttctt ggaatctaca taatgacctt attgggaaat
      121 cttctcatcc ttacggttac gtccagtgac cacagcctcc aaactcccat gtacttcttt
      181 ctgtccaatt tctccttcct tgagatctgg tatacaactt ccattgctcc gaagatgctg
      241 aagacccttc tctctggtcc agaggcgatt tcttttacag gatgtgtggc tcagttttat
      301 ttctttggct ccatggcagt agttgagtgt tttctcctgg cagccatgtc ttatgaccga
      361 tatcttgcta tctgcagccc acttcggtac ccatctctca tgaactttca cacatgtatc
      421 ttgcttgcag gtggatcttg ggtgggtgga tttttaactc ctgttgttac tgtcacgatg
      481 actttccagc tccagttctg tgcatcaaat gagattgatc atttcttttg tgaccttgcc
      541 cctgtcctga agttggcgtg ttctgatcct gaggaagtaa aaaagactac tttcctcatg
      601 gcctcctttg tcaccatggt gcccttcttg ctcactgtaa cctcctacat aaacattgtt
      661 gttgctgtcc tcaggatgtc atcagcggca ggaaagcaac gagccttttc cacgtgctct
      721 tcccacctca ctgtggtttc tttgtactat ggaactctgg gaacagtata tgctataccc
      781 acggcaactc aggccacagt cctaaacaag gtcttctcac tgctctacac tgtggtcacc
      841 cccatggtca accctattgt gtatagcttg agaaacaagg atgttaaaaa ggcagtgcag
      901 aagctcctga gcaagtggga atatcccatg aagacctaa
//
