LOCUS       NM_001001125             939 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily M member 5
            (Or5m5), mRNA.
ACCESSION   NM_001001125
VERSION     NM_001001125.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR22582416.1078177.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000003.1  91433531-91434469
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..939
                     /gene="Or5m5"
                     /gene_synonym="Olr471"
                     /note="olfactory receptor family 5 subfamily M member 5"
                     /db_xref="GeneID:406046"
                     /db_xref="RGD:1333102"
     CDS             1..939
                     /gene="Or5m5"
                     /gene_synonym="Olr471"
                     /note="olfactory receptor gene Olr471; olfactory receptor
                     471"
                     /codon_start=1
                     /product="olfactory receptor Olr471"
                     /protein_id="NP_001001125.1"
                     /db_xref="GeneID:406046"
                     /db_xref="RGD:1333102"
                     /translation="MVRGNYSMVTEFILLGLTDRPELQPLLFVLFLVIYLITVGGNLG
                     MMVLIRIDSRLHTPMYYFLASLSCLDLCYSTNVTPKMLVNFLAEKKTISYAACLVQCY
                     FFIAMVITEYYMLAVMAYDRYMAICNPLLYSSKMSKGVCVRLIAGPYIYGFLSGLMET
                     MWTYRLTFCGSNIINHFYCADPPLIRLSCSDTFIKETSMFVVAGFNLSNSLLIILISY
                     LFILIAILRMRSAEGRRKAFSTCGSHLVAVTVFYGTLFCMYVRPPTDKSVEQSKIIAM
                     FYTFVSPMLNPIIYSLRNKDVKHAFQKLVRRNVLSK"
     exon            1..939
                     /gene="Or5m5"
                     /gene_synonym="Olr471"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggtcagag gcaattactc catggtgact gaatttattc tcttgggatt aacagatcgt
       61 ccagagctgc agcctttgct ttttgtgctc ttcctggtga tctatctgat cactgtggga
      121 gggaatcttg gcatgatggt gttgatcagg atagattcac gcctgcatac ccctatgtac
      181 tactttcttg ccagtttgtc atgtttggat ttgtgctatt ctactaatgt gacccccaag
      241 atgctggtaa actttttagc agagaagaaa accatctcat atgcggcttg cttagtccag
      301 tgttattttt tcattgctat ggtgattact gaatattata tgctagctgt gatggcctat
      361 gacagataca tggccatctg caaccctttg ctttacagca gcaagatgtc caaaggggta
      421 tgtgtgcgtc tgattgccgg gccctatata tatggctttc ttagtggcct gatggaaacc
      481 atgtggacat atcgcttgac cttctgtggc tccaatatta tcaaccactt ctactgtgct
      541 gaccctcctc tcatcagact ctcctgctct gacacattca ttaaggaaac atcgatgttt
      601 gtggtagcag gatttaacct ctccaattcc ttgctcataa tcctcatttc ctacctgttc
      661 attctcattg ccatcttgag gatgcgttct gctgaaggta ggcgcaaagc cttttctacc
      721 tgtgggtctc acctggtggc agtgactgtg ttttatggga ctctattctg catgtatgtt
      781 agacctccca cagacaagtc agtggagcag tccaaaataa ttgccatgtt ctatactttt
      841 gtaagtccca tgttgaaccc tatcatttac agtctgagga ataaggatgt gaaacacgct
      901 tttcagaagc tggtcagaag aaatgtgctt tcaaagtaa
//
