LOCUS       NM_001000049             954 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily K member 16
            (Or5k16), mRNA.
ACCESSION   NM_001000049 XM_221551
VERSION     NM_001000049.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 954)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000011.1.
            
            On Aug 30, 2004 this sequence version replaced XM_221551.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-954               JAXUCZ010000011.1  55069912-55070865
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q12"
     gene            1..954
                     /gene="Or5k16"
                     /gene_synonym="Olr1559; ratchr11-42464605-42465558_ORF"
                     /note="olfactory receptor family 5 subfamily K member 16"
                     /db_xref="GeneID:288187"
                     /db_xref="RGD:1333528"
     CDS             1..954
                     /gene="Or5k16"
                     /gene_synonym="Olr1559; ratchr11-42464605-42465558_ORF"
                     /note="olfactory receptor gene Olr1559; olfactory receptor
                     Olfr180-like; olfactory receptor 1559"
                     /codon_start=1
                     /product="olfactory receptor Olr1559"
                     /protein_id="NP_001000049.1"
                     /db_xref="GeneID:288187"
                     /db_xref="RGD:1333528"
                     /translation="MEKTNHSLTTEFILVGFSDHPDLKILLFLVFSVIYLVTMVGNLG
                     LVALIYMEPRLHTPMYIFLGNLALMDSCCSCAITPKMLENFFSVDRRISLYECMAQFY
                     FLCLAETADCFLLAAMAYDRYVAICNPLQYHTMMSKKLSLQMSIGIFIASNLHSLIQV
                     GCLLRLTFCKSNRIDHFFCDILPLYRLSCTDPFINELMIYIFSMPIQVFTITTILVSY
                     FCILFTIFKMKSKDGRGKAFSTCASHFFSVSIFYTCLLMYIRPFEEGNKDIPVAVFYT
                     VIIPLLNPFIYSLRNAEVVNAAKKVMKTYNIFKNASASIAH"
     exon            1..954
                     /gene="Or5k16"
                     /gene_synonym="Olr1559; ratchr11-42464605-42465558_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggagaaga caaatcactc cttgacaaca gagttcatcc tggtaggatt ctcagatcac
       61 ccagacttaa agatacttct gttcctggtg ttctctgtca tctatctggt caccatggtg
      121 gggaatcttg gactggtggc cttgatctac atggagcctc gtctccacac acccatgtac
      181 atcttcctgg gcaacctggc cctgatggac tcctgctgct cctgtgccat cactcccaag
      241 atgctagaga acttcttttc tgtggacaga aggatctctc tctatgaatg catggcacag
      301 ttctatttcc tctgtcttgc tgaaacagca gactgctttc ttctggcagc catggcctat
      361 gaccgctatg tggccatatg caacccactg cagtaccaca ccatgatgtc caagaagctc
      421 tcccttcaga tgagtatagg catattcata gccagtaacc tgcattcctt gattcaagta
      481 gggtgcctct taaggttaac tttctgtaaa tcaaatcgca ttgatcactt cttctgtgat
      541 attcttcccc tgtatcggct ctcctgtaca gacccattta tcaatgaact aatgatatat
      601 attttttcaa tgccaattca agtctttacc attacaacta tcttggtctc ttacttctgc
      661 attcttttca ctattttcaa gatgaaatcc aaggatggca gaggaaaagc attttctact
      721 tgtgcatccc attttttttc tgtgtcaata ttctacacct gtcttctcat gtatattaga
      781 ccatttgaag aaggtaataa agacatacca gtggctgtgt tttatacagt aataattcct
      841 ttgttaaatc cttttattta cagtctgaga aatgcagagg tagtaaatgc tgctaagaaa
      901 gttatgaaaa cttataatat ttttaaaaat gcttctgctt ctatagcaca ttga
//
