LOCUS       NM_001000329             945 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily I member 1
            (Or5i1), mRNA.
ACCESSION   NM_001000329 XM_230169
VERSION     NM_001000329.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Aug 30, 2004 this sequence version replaced XM_230169.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-945               JAXUCZ010000003.1  93723884-93724828
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..945
                     /gene="Or5i1"
                     /gene_synonym="Olr588; ratchr3-71459371-71460315_ORF"
                     /note="olfactory receptor family 5 subfamily I member 1"
                     /db_xref="GeneID:295822"
                     /db_xref="RGD:1333671"
     CDS             1..945
                     /gene="Or5i1"
                     /gene_synonym="Olr588; ratchr3-71459371-71460315_ORF"
                     /note="olfactory receptor gene Olr588; olfactory receptor
                     588"
                     /codon_start=1
                     /product="olfactory receptor Olr588"
                     /protein_id="NP_001000329.1"
                     /db_xref="GeneID:295822"
                     /db_xref="RGD:1333671"
                     /translation="MEFTNGNYTLVTEFILLGFPTRPELQIILFLLFLMLYGMILIGN
                     IGLMLLIRTDSHLQTPMYFFLSNLSFVDLCYSSVIVPNMLVNFLSSKKSISYLGCALQ
                     FYFFCTFADTESFILAAMAYDRYVAICNPLLYTVAMSKSLCTWLIVLSYVGGNMSSLV
                     HTSFAFILKYCDKNIINHFFCDLPPLLKLSCTDTSINEWLLSTYGSSVEVICFFIIII
                     SYFFILLSVLKIRSTSGRKKTFSTCASHLTSVAIYQGTLLFIYSRPSSLYSPNTDKII
                     SVFYTIIIPVLNPLIYSLRNKDVKDAAKKALRSKIQSS"
     exon            1..945
                     /gene="Or5i1"
                     /gene_synonym="Olr588; ratchr3-71459371-71460315_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggaattta caaatggaaa ctacacattg gtcactgaat ttatcctctt aggatttcca
       61 acacgacctg aactccaaat catcttattc cttctgtttc tgatgttata tggtatgata
      121 ttgataggga atattggctt gatgttgtta attaggacgg actcacatct tcaaactcct
      181 atgtactttt tcctcagcaa cctctccttt gtagaccttt gttattcctc agtcattgtt
      241 cccaacatgc ttgttaattt cctctcatca aagaaatcta tctcttacct tggctgtgcg
      301 ttgcaatttt atttcttctg cacatttgca gatactgaat cctttatctt ggctgccatg
      361 gcttatgatc gctacgttgc catttgcaat cctttgttat acacagttgc aatgtccaag
      421 agtctctgca catggttaat cgtgctgtca tatgttggtg gcaacatgag ttcccttgtt
      481 cacacatctt tcgcctttat tctgaaatat tgtgacaaaa atatcattaa tcatttcttc
      541 tgcgacctcc ctcctctcct gaagctttcc tgtacagaca cgtccattaa tgagtggcta
      601 ctttccactt atgggagttc cgtggaggtc atctgtttct tcatcatcat catctcctac
      661 tttttcatcc ttctctcagt cttgaagatc cggtctacga gtgggagaaa aaaaaccttc
      721 tccacatgtg cctctcacct gacctctgtg gccatctatc agggcacact tctattcatt
      781 tattctcggc ccagctccct atattcccca aatacagata aaatcatctc agtgttctac
      841 accattatta tcccagtgct gaatccactt atttatagtt tgagaaataa agatgtaaag
      901 gatgctgcca agaaagctct aaggtctaaa atacaatcct catga
//
