LOCUS       NM_001001353             930 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily H member 27
            (Or5h27), mRNA.
ACCESSION   NM_001001353 XM_221572
VERSION     NM_001001353.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 930)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000011.1.
            
            On Aug 30, 2004 this sequence version replaced XM_221572.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-930               JAXUCZ010000011.1  54620574-54621503   c
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q12"
     gene            1..930
                     /gene="Or5h27"
                     /gene_synonym="Olr1536"
                     /note="olfactory receptor family 5 subfamily H member 27"
                     /db_xref="GeneID:288199"
                     /db_xref="RGD:1333449"
     CDS             1..930
                     /gene="Or5h27"
                     /gene_synonym="Olr1536"
                     /note="olfactory receptor gene Olr1536; olfactory receptor
                     1536"
                     /codon_start=1
                     /product="olfactory receptor Olr1536"
                     /protein_id="NP_001001353.1"
                     /db_xref="GeneID:288199"
                     /db_xref="RGD:1333449"
                     /translation="MGTENATLLTEFVLTGLSHQPSWKISPFLLFLSIYLITIVGNLG
                     LIILIWNDPCLQIPMYLFLGCLALVDTWLSTTVTPKMFLTFIDKSKLISLSECMIQFF
                     SFVMCATMECFLLAAMAYDRYAAICKPLLYPVIMTNRLCVRLLILTFITGILHASIQE
                     GMLFRLTFCNLNVIHHFYCDVMPLLKISCTDPSLNYLIVFIFSGSIQVFTISTVLGSY
                     TLVMFTILRKRSSKGVKKAFSTCGAHLLSVCLYYGSLLFMYLLPASQKAQDEDMMDSV
                     FYTVIIPVMNPIIYSLRNKQIKDSLEKFLKRNV"
     exon            1..930
                     /gene="Or5h27"
                     /gene_synonym="Olr1536"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgggaacag aaaatgcaac actgctgaca gaatttgttc tcacaggact cagtcaccaa
       61 ccgtcatgga aaatctcccc gttcctgctg ttcttgtcca tctatcttat caccattgtg
      121 gggaatcttg gtctaattat tctcatctgg aatgaccctt gccttcaaat ccccatgtac
      181 ttatttcttg gatgtttagc gcttgttgat acttggttat caaccacggt gacaccaaag
      241 atgttcctca cgttcataga taagagtaaa ctgatctctc tttctgaatg catgatacag
      301 ttcttttctt ttgtgatgtg tgcaaccatg gagtgttttc tcttagcagc aatggcctat
      361 gatcgctatg cagccatatg caaaccttta ctgtacccag tgatcatgac aaatagactg
      421 tgtgtgcgtc tgctcatctt gacctttata actggaattc ttcatgcttc aattcaagaa
      481 ggcatgttgt tcagattaac cttctgtaat ttgaatgtaa tacatcattt ttactgtgat
      541 gttatgccgc tgttaaagat ttcctgtacc gacccttctc ttaattacct aattgttttt
      601 attttctctg gctcaattca agttttcact atttcaactg ttctaggctc ttacacactt
      661 gttatgttta caatcttaag aaagagatct tccaaaggtg taaagaaagc cttctccaca
      721 tgtggagccc atctcctctc tgtgtgctta tattatggct ctcttctctt catgtatctg
      781 cttcctgcat cccaaaaagc acaggatgaa gacatgatgg actctgtatt ctacactgtc
      841 ataatccctg tgatgaatcc aatcatctat agtctgagaa acaagcaaat caaggactca
      901 ctggaaaaat tcttaaagag aaatgtttag
//
