LOCUS       NM_001000656             957 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily D member 47
            (Or5d47), mRNA.
ACCESSION   NM_001000656
VERSION     NM_001000656.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 957)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-957               JAXUCZ010000003.1  93921636-93922592   c
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..957
                     /gene="Or5d47"
                     /gene_synonym="Olr604"
                     /note="olfactory receptor family 5 subfamily D member 47"
                     /db_xref="GeneID:404855"
                     /db_xref="RGD:1333473"
     CDS             1..957
                     /gene="Or5d47"
                     /gene_synonym="Olr604"
                     /note="olfactory receptor gene Olr604; olfactory receptor
                     604"
                     /codon_start=1
                     /product="olfactory receptor Olr604"
                     /protein_id="NP_001000656.1"
                     /db_xref="GeneID:404855"
                     /db_xref="RGD:1333473"
                     /translation="MLLSGRNNSEMIFTLLGFSDYPELKVPLFLVFLIIYSIIVVGNI
                     GMILVIRINPKLHTPMYFFLSHLSFVDFCYSSIITPKMLVNLVAKDRTISFRECIVQY
                     FLFCIFVVTEAFLLVVMAYDRFVAICNPLLYTVVMSQKLCFTLVMGSYTWGFTCSLTL
                     TCSTVQLSFHTVNIIDHFFCEFSSLLALSSSDTRISQLLLFVFATFNAVSTLLIILLS
                     YLFIVVTVLKTHSASGLRKAFSTCASHLAAITIFHGTILFLFCVPNSQNSRLTVKVGS
                     VFYTVVIPMLNPLIYTLRNKDVLDTIRKIMTMVSCVKNDRHN"
     exon            1..957
                     /gene="Or5d47"
                     /gene_synonym="Olr604"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgttgctgt ctgggagaaa caatagtgag atgatattca ccctcttggg cttctcagat
       61 taccctgaat tgaaagtccc tctcttttta gtatttctca tcatctacag catcattgtg
      121 gttgggaata ttggcatgat ccttgtgatc agaattaatc ccaaactgca cacccccatg
      181 tacttctttc tcagccacct ctcctttgtg gatttctgct attcttctat cattactccc
      241 aagatgctcg tgaatcttgt tgcaaaggac agaaccattt catttagaga atgcatagta
      301 caatattttt tattttgtat ctttgtagta actgaagcct ttttattagt ggttatggcc
      361 tatgaccgat ttgtggctat ctgcaaccct ctgctttaca cagtagtcat gtcccagaaa
      421 ctctgcttca cactggtgat gggatcctat acatgggggt tcacatgttc cttgacactg
      481 acatgttcta ctgtgcaatt atcttttcat actgtcaata taatagatca cttcttctgt
      541 gaattctctt cactgctagc cctttcttcc tctgatactc gcatcagtca attactgcta
      601 tttgttttcg ctacatttaa tgctgtcagc acattactca ttattctgct gtcttacctg
      661 ttcattgttg tcactgtcct taagacgcat tcagccagtg ggcttcgcaa ggctttctcc
      721 acctgtgcat cccacctagc agccatcact atcttccatg gtacaatttt attccttttt
      781 tgtgtgccca actctcagaa ttctaggctc acagtcaagg tgggctctgt attttacaca
      841 gtggtgatcc ccatgcttaa ccccctaatc tatactttga gaaataagga tgtcctagac
      901 acaattagaa aaataatgac tatggtctca tgtgttaaga atgatagaca caattaa
//
