LOCUS       NM_001000336             951 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily D member 41
            (Or5d41), mRNA.
ACCESSION   NM_001000336 XM_230184
VERSION     NM_001000336.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 951)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Aug 30, 2004 this sequence version replaced XM_230184.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-951               JAXUCZ010000003.1  94093130-94094080   c
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..951
                     /gene="Or5d41"
                     /gene_synonym="Olr610"
                     /note="olfactory receptor family 5 subfamily D member 41"
                     /db_xref="GeneID:295836"
                     /db_xref="RGD:1333420"
     CDS             1..951
                     /gene="Or5d41"
                     /gene_synonym="Olr610"
                     /note="olfactory receptor gene Olr610; olfactory receptor
                     610"
                     /codon_start=1
                     /product="olfactory receptor Olr610"
                     /protein_id="NP_001000336.1"
                     /db_xref="GeneID:295836"
                     /db_xref="RGD:1333420"
                     /translation="MASEVTNQSSVTTFILVGFSEYPQLQIPLFLLFLAIYSVTLMGN
                     LGILVVIKINPKLHTPMYFFLSHLSFLDICYSSVFTPKLLQILIMEDRTISFTGCMIQ
                     FFFICTFVITEMFMLAVMAYDRFVAVCNPLLYTVVMPFQFCALLVAGTYMIGGLCAVI
                     LIYTLLQLSYCEYGIINHFGCEYSAVISVSCSDSSFSQITCLVISIVSESSSVLITLA
                     SYVFIVVTIIKMPSKGGLRKAFSTCTSHLTAITIFHGIILLLYCVPNSNSSRLFVKVA
                     TALYTVMIPMLNPLIYSLRNKDVKDTVRRLISSKLHSHLT"
     exon            1..951
                     /gene="Or5d41"
                     /gene_synonym="Olr610"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggcctctg aagtgacaaa ccagagttct gtgaccacat tcatcttggt gggtttctca
       61 gaatatccac agctccaaat acccctgttt cttctgttct tggccatcta ctcagtgaca
      121 ctgatgggga acctgggcat acttgtggtt ataaagatca atcctaaact tcacacaccc
      181 atgtactttt tccttagcca tctttcattt ctggatatat gttattctag tgtatttaca
      241 cccaaacttt tacagatctt gatcatggaa gacaggacga tttctttcac aggatgcatg
      301 attcaatttt tctttatttg tacattcgtg attacagaaa tgttcatgtt agcagtgatg
      361 gcctatgaca ggtttgtggc tgtttgtaat cctctactct acacagttgt aatgcctttt
      421 cagttctgtg ctttgctagt agctgggact tacatgattg gtggactatg tgctgtgata
      481 ctcatatata ctcttttgca actatcctat tgtgaatatg gcatcatcaa tcactttggc
      541 tgtgagtact ctgctgtcat ctctgtatct tgctctgact cctcctttag ccagataaca
      601 tgcttagtca tttctatagt tagtgaatct tctagtgtct tgatcacttt agcctcatat
      661 gtgttcatag ttgtcactat tataaagatg ccttccaaag gaggactacg aaaagccttt
      721 tccacatgta cttcccacct gactgccata acaatctttc atgggatcat tctcctacta
      781 tattgtgtcc ccaactcaaa cagctcacgg ctctttgtga aagtggccac tgctctttat
      841 acagtcatga tccccatgct gaaccccctt atctatagcc ttagaaataa agatgtaaag
      901 gacacagtca ggagactcat cagctcaaaa ctacactccc acttgacatg a
//
