LOCUS       NM_001000337             951 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily D member 40
            (Or5d40), mRNA.
ACCESSION   NM_001000337 XM_230187
VERSION     NM_001000337.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Aug 30, 2004 this sequence version replaced XM_230187.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-951               JAXUCZ010000003.1  94134608-94135558   c
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..951
                     /gene="Or5d40"
                     /gene_synonym="Olr614; ratchr3-71882327-71881377_ORF"
                     /note="olfactory receptor family 5 subfamily D member 40"
                     /db_xref="GeneID:295839"
                     /db_xref="RGD:1332979"
     CDS             1..951
                     /gene="Or5d40"
                     /gene_synonym="Olr614; ratchr3-71882327-71881377_ORF"
                     /note="olfactory receptor gene Olr614; olfactory receptor
                     614"
                     /codon_start=1
                     /product="olfactory receptor Olr614"
                     /protein_id="NP_001000337.1"
                     /db_xref="GeneID:295839"
                     /db_xref="RGD:1332979"
                     /translation="MIHAMINQSSVTTFILVGFSEYPHLQLPLFLMILTIYTITLVGN
                     VGIIVIRRINPKLHTPMYFFLSHLSFLDICYSSVFTPKLLEILIVENRTIFLKDCMTQ
                     FFFGCACVITEMFMLAVMAYDRFVAVCNPLLYTVAMSHQLCGLLIAGSYMWGGLCAVI
                     ITYTLLELSYCEPGIINHFGCEYSAIISVSCSDPSFSQMTCLVISILSEGSSLLITMA
                     SYVFIVVTIIKMPSKGGLRKAFSTCTSHLTAISIFHGIILLLYCVPNAKSSQLLVKIA
                     TVLYTVLIPMLNPLIYSLRNKDVKDTVKRLIGSKLHRHSM"
     exon            1..951
                     /gene="Or5d40"
                     /gene_synonym="Olr614; ratchr3-71882327-71881377_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgatacatg caatgataaa ccagagttct gtaaccacat ttattctggt gggcttctca
       61 gaatacccac acctccagct acccctcttc cttatgatac tgaccattta cacaatcact
      121 ctggtaggaa atgttggcat aattgtgatc cgaaggatca accctaagct tcacacaccc
      181 atgtactttt tcctgagtca tctttcattt ttggatatat gttattctag tgtatttaca
      241 ccaaaattgt tagagatctt gattgtggaa aacagaacta ttttcttaaa agattgcatg
      301 acacagtttt tctttggctg tgcatgcgtg attacagaga tgttcatgtt agcagtgatg
      361 gcctacgaca ggtttgtggc tgtttgcaac cctctgctct atactgttgc tatgtctcat
      421 caattgtgtg gtctcctaat agctggaagt tatatgtggg gaggtctgtg tgctgtgata
      481 atcacgtaca ctctcttaga gctgtcttat tgtgaacctg gaatcatcaa tcactttggc
      541 tgtgagtatt cagccatcat ctctgtatcc tgttctgacc cctccttcag ccagatgaca
      601 tgcttagtca tttccatatt aagtgagggt agtagccttc ttatcactat ggcctcctat
      661 gtcttcatag ttgttacaat catcaaaatg ccttctaaag gtggactccg aaaagccttc
      721 tccacctgca cttcccacct gactgctatc agcatcttcc atgggattat tctccttctg
      781 tactgtgtac ccaacgcaaa gagctcacag ctcctagtca aaatagcaac tgtgctctat
      841 acagtcctga ttcccatgct gaaccccctc atctacagcc tacggaacaa agatgtaaag
      901 gacacagtga agaggctcat cggctcaaaa ctgcaccgtc attcaatgta a
//
