LOCUS       NM_001000397             984 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily C member 1
            (Or5c1), mRNA.
ACCESSION   NM_001000397 XM_231235
VERSION     NM_001000397.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 984)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Aug 30, 2004 this sequence version replaced XM_231235.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-984               JAXUCZ010000003.1  41253167-41254150
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q11"
     gene            1..984
                     /gene="Or5c1"
                     /gene_synonym="Olr434"
                     /note="olfactory receptor family 5 subfamily C member 1"
                     /db_xref="GeneID:296694"
                     /db_xref="RGD:1333139"
     CDS             1..984
                     /gene="Or5c1"
                     /gene_synonym="Olr434"
                     /note="olfactory receptor gene Olr434; olfactory receptor
                     434"
                     /codon_start=1
                     /product="olfactory receptor Olr434"
                     /protein_id="NP_001000397.1"
                     /db_xref="GeneID:296694"
                     /db_xref="RGD:1333139"
                     /translation="MSSENFTWSRVTPAEFILLGITNRWDLRVTLFLIFLPIYLMSLL
                     GNVGMVLLIRIDARLHTPMYFFLANLSLLDAFYSSAIGPKMLVDLLLSRATIPYAACA
                     LQMFVFAGLADAECCLLAVMAYDRYVAIGNPLLYTTVMSPRLCLALLGASGLGGAVSA
                     FVHTTFTFRLSFCGSLEVNSFFCDIPPLLAISCNDTSLNELLLFAVCGFIQTATVLAI
                     AVSYGFIAGAVIRMQSVEGRRRAASTCGSHLTAVAILYGTLIFMYLRPSSSYALDTDK
                     MASVFYTLVIPALNPLIYSLRNKEVKEAFRRTCHRFCCSGRSTSDWPQEAP"
     exon            1..984
                     /gene="Or5c1"
                     /gene_synonym="Olr434"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgagctcag agaacttcac ctggtccaga gttacgcctg ctgagttcat tctcttgggg
       61 atcacaaatc gttgggacct gcgcgtgacc ctcttcctga tattcctgcc catctacctc
      121 atgagcctgc tgggaaatgt gggaatggtg ctactcatcc gtatagatgc caggctccac
      181 acacccatgt acttcttcct ggccaacctc tccctgctgg atgccttcta ttcctctgcc
      241 ataggcccca agatgctagt ggatcttcta ctgtcccgtg ccaccatccc ttatgcagcc
      301 tgtgccctcc agatgtttgt ctttgcaggg ttggctgatg ctgagtgttg cctgttagca
      361 gtcatggcct atgatcgcta tgtggccatt gggaaccctc tcctctatac cacagtcatg
      421 tcaccccgtc tatgcctggc cctccttggg gcatcaggcc tgggaggagc agtgagtgcc
      481 tttgtacata caactttcac cttccgcctg agcttctgtg gctcactaga agtcaacagc
      541 ttcttctgcg atattcctcc actgcttgcc atctcctgca atgacaccag tctaaatgaa
      601 ctcctccttt ttgctgtctg tggttttatc cagacagcca cagtgttggc tattgctgtg
      661 tcttatggat tcatcgctgg tgctgtgatc cgcatgcagt cagttgaggg ccgtcggagg
      721 gcagcttcca cttgtggctc tcacctcaca gctgtagcca tactatatgg gactcttatt
      781 ttcatgtatc tgcgtcctag ctccagctat gccctggaca cggacaagat ggcatcagtg
      841 ttctatactc tcgtcattcc agctctcaac ccactcatct acagccttag aaacaaggaa
      901 gtcaaggaag ccttccggcg cacttgccat cgattctgct gctcggggcg gagcaccagt
      961 gactggccac aggaagctcc ttaa
//
