LOCUS       NM_001000253             945 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily B member
            12B (Or5b12b), mRNA.
ACCESSION   NM_001000253 XM_219630
VERSION     NM_001000253.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 30, 2004 this sequence version replaced XM_219630.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR22582419.3088038.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-945               JAXUCZ010000001.1  219467328-219468272
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..945
                     /gene="Or5b12b"
                     /gene_synonym="Olr340"
                     /note="olfactory receptor family 5 subfamily B member 12B"
                     /db_xref="GeneID:293785"
                     /db_xref="RGD:1334063"
     CDS             1..945
                     /gene="Or5b12b"
                     /gene_synonym="Olr340"
                     /note="olfactory receptor gene Olr340; olfactory receptor
                     340"
                     /codon_start=1
                     /product="olfactory receptor Olr340"
                     /protein_id="NP_001000253.1"
                     /db_xref="GeneID:293785"
                     /db_xref="RGD:1334063"
                     /translation="MENSTKVTDFIFAGLTDDPELQIPLFIVFLLIYLSTLLGNLGMV
                     GLILLDSHLHTPMYLFLSHLSLVDFGYSSAVTPKVMAGLLSIDKTISHNGCAIQFFFF
                     VSFITTESFLLAAMAYDRYAAVCKPLLYTTTMTTNTCVCLIIGSYVCGFLNSSIHTGN
                     IFRLSFCKSDVIDHFFCDAPPLLALSCSDTSVSEMVILFVVGFNDLFSIVVIMVSYLF
                     IFITILRMHSSEGRQKTFSTCASHLTAVSIFYGSGIFMYLQPSSSHTMGSDKMASVFY
                     TMIIPMLNPLVYSLRNKEVKSAFKKAVEKAKFSIAFTF"
     exon            1..945
                     /gene="Or5b12b"
                     /gene_synonym="Olr340"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggagaata gtaccaaggt gactgacttc atttttgcag ggttaacaga tgacccagag
       61 ctccagatac cactcttcat tgtcttcctt ctcatctatc tcagcacctt gcttgggaac
      121 ctgggaatgg tagggttgat tctgctggac tcacacctcc atacacccat gtatcttttt
      181 ctcagtcacc tgtctctggt ggactttggt tattcttcag ctgtcactcc caaagtaatg
      241 gcaggtctcc tttcaataga caaaaccata tctcacaatg gttgtgctat acaattcttc
      301 ttctttgtaa gctttataac tacggaaagc ttccttttgg ctgccatggc ttatgaccgc
      361 tatgcagcag tgtgtaagcc cctgctttat accaccacca tgaccacaaa cacatgtgtt
      421 tgtctgatca taggctccta tgtctgtggc ttcctaaatt cttctattca cactgggaac
      481 attttcaggc tctccttctg caagtctgat gtgatagacc actttttctg tgatgcccca
      541 cctctcttgg ccctctcatg ctcagacacc tctgtcagtg agatggtgat tttatttgtg
      601 gtggggttca atgatctctt ctctattgtg gtcatcatgg tctcctacct gtttatattc
      661 atcactattc tgaggatgca ttcatctgaa ggacgccaga agaccttttc cacatgtgct
      721 tcccacctca ctgcagtctc catcttctat gggtcaggca tcttcatgta tttacagccc
      781 agctccagtc acaccatggg aagtgacaag atggcatctg tgttctatac catgatcatc
      841 cccatgttga accctctggt ctacagcctg aggaacaaag aggtcaagag tgcattcaaa
      901 aaggctgtgg agaaagcaaa attttctata gcattcacat tttaa
//
