LOCUS       NM_001000834             936 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily AU member 1
            (Or5au1), mRNA.
ACCESSION   NM_001000834
VERSION     NM_001000834.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000015.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-936               JAXUCZ010000015.1  27212536-27213471   c
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p14"
     gene            1..936
                     /gene="Or5au1"
                     /gene_synonym="Olr1638"
                     /note="olfactory receptor family 5 subfamily AU member 1"
                     /db_xref="GeneID:405123"
                     /db_xref="RGD:1333383"
     CDS             1..936
                     /gene="Or5au1"
                     /gene_synonym="Olr1638"
                     /note="olfactory receptor gene Olr1638; olfactory receptor
                     1638"
                     /codon_start=1
                     /product="olfactory receptor Olr1638"
                     /protein_id="NP_001000834.1"
                     /db_xref="GeneID:405123"
                     /db_xref="RGD:1333383"
                     /translation="MERTNLSQEMEFELLGLTSDPQLQKLLFVVFLIMYSITVLGNLV
                     MFFLIHVSTTLHTPMYSLLKSLSFLDFCYSSTVVPQTLMNFLVQRKVISYFGCMAQMF
                     FYAGFATSECYLIAAMAYDRYVAVCNPLLYPTIVSPNVCASLIVGSYSAGFLNSLIHT
                     SCIFSLNFCGAHVVTHFFCDGPPILSLSCVDTSLCEILLFIFAGFNLLSCTLTILISY
                     FLIFVAILRMHSTQGRFKALSTCTSHLTAVCFFFGTTLFMYLRPRSSYSLTQDRTVAV
                     IYTVVIPMLNPLIYSLRNKDVKEALRRVWGWKSMR"
     exon            1..936
                     /gene="Or5au1"
                     /gene_synonym="Olr1638"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggaaagaa caaacttgag ccaagagatg gagtttgagc tcttgggcct caccagtgac
       61 ccccagctcc aaaagctgct ctttgtggtg tttctgatca tgtactccat cactgtgttg
      121 ggaaacctgg tcatgttctt tctcatccat gtgagtacca ctctgcacac acccatgtat
      181 tccctcctca agagcctttc cttcctggat ttctgctact cttctacggt ggtcccccag
      241 acactgatga acttcttggt tcagaggaag gtaatctctt actttggctg catggctcag
      301 atgttctttt acgcgggctt cgccaccagc gagtgctacc tcattgccgc gatggcctat
      361 gaccgctacg tcgctgtttg caacccactc ctctatccaa ccatcgtgtc tcctaacgtc
      421 tgtgcctctc tcatcgttgg ctcctatagc gccgggtttc tcaattctct gatccacaca
      481 agctgcatct tcagtctgaa cttctgtggt gctcacgtgg tcactcattt cttctgcgac
      541 ggaccgccca tcctgtccct gtcctgcgtg gacacttcgc tgtgtgagat cttgctcttc
      601 atttttgcgg gctttaacct tctgagctgc actctcacca tcttgatttc ctacttctta
      661 atcttcgtcg ccatcctccg aatgcattca acccagggaa ggttcaaagc gctctccacc
      721 tgcacttccc acctcacggc tgtgtgcttc ttctttggca cgacactttt tatgtacttg
      781 cgccctaggt ccagctactc cttgacccag gaccgcacag ttgccgtgat ctacacagtg
      841 gtgatcccaa tgctgaaccc cttaatctac tctttgagaa acaaggatgt gaaggaggct
      901 ttaaggaggg tttggggctg gaaatcaatg cgatga
//
