LOCUS       NM_001000566             939 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily AQ member 7
            (Or5aq7), mRNA.
ACCESSION   NM_001000566 XM_345384
VERSION     NM_001000566.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Aug 30, 2004 this sequence version replaced XM_345384.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000003.1  92745343-92746281   c
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..939
                     /gene="Or5aq7"
                     /gene_synonym="Olr542"
                     /note="olfactory receptor family 5 subfamily AQ member 7"
                     /db_xref="GeneID:366105"
                     /db_xref="RGD:1333836"
     CDS             1..939
                     /gene="Or5aq7"
                     /gene_synonym="Olr542"
                     /note="olfactory receptor 542; olfactory receptor gene
                     Olr542"
                     /codon_start=1
                     /product="olfactory receptor Olr542"
                     /protein_id="NP_001000566.1"
                     /db_xref="GeneID:366105"
                     /db_xref="RGD:1333836"
                     /translation="MEVWNHTGVKEFILVGLTENPNWQVPLFLLFCIIYFIILFGNWG
                     MIFLIWLHAQLHTPMYFFLSNLSFCDICYSTIIAPKTIINLLSEHKSTRLFACILQSF
                     FFAVYVTTEVVLLSMMAYDRYVAIANPLMYTVIMTKSICTQMVLASYLAGLINSMIHT
                     IGLLKLDFCGPNIVNHFFCDVPPLLKLACSDPHINEMLLLVFSGIIAISTFIIVMVSY
                     SHIIIAILRIRSAEGRRKAFSTCASHLTAVALFYGSVTFSYIQPSSQYSMEQEKVSAV
                     FYTLVIPMLNPLIYSLRNKDVKEAIQKLIFGKRNAC"
     exon            1..939
                     /gene="Or5aq7"
                     /gene_synonym="Olr542"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggaagttt ggaatcatac aggtgtgaaa gaattcatac tggttggctt aacagaaaat
       61 cctaattggc aggttcctct ctttttgctt ttttgcataa tttattttat cattcttttt
      121 ggtaattggg ggatgatctt cctgatctgg ttgcatgccc aacttcatac cccaatgtac
      181 ttctttctta gtaacctctc cttctgtgac atctgctact ctactatcat tgctcctaaa
      241 acgatcatca atctcctatc agaacacaag tctactaggc tgtttgcctg tattctgcag
      301 agtttctttt ttgcagtata tgtaaccaca gaagtagtcc tcctgtctat gatggcttat
      361 gatcgctatg tggcaattgc aaacccttta atgtatacag ttattatgac aaagagcatc
      421 tgcactcaaa tggttcttgc aagttacttg gctggtctca taaattccat gattcacaca
      481 ataggtttac tcaaactaga tttctgtggt cccaacattg tgaatcactt cttctgtgac
      541 gttcctcctc ttttgaagct tgcatgctct gatccacaca tcaatgagat gctactcttg
      601 gtcttctctg gtataattgc tatttctact ttcatcatcg tcatggtatc ctatagccac
      661 attatcattg ccatcctgag aatccgctcc gctgagggga gacgcaaagc cttctcaact
      721 tgtgcctcac acctgacagc tgtggcatta ttttatggat cagtgacatt tagctatatc
      781 cagccaagtt ctcagtactc catggaacag gaaaaagttt ctgctgtgtt ttacacattg
      841 gtcatcccca tgttgaaccc tctgatttac agcctgagaa ataaggatgt taaagaagca
      901 atccagaagt tgatttttgg gaagagaaat gcctgttga
//
