LOCUS       NM_001000565             939 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily AQ member 6
            (Or5aq6), mRNA.
ACCESSION   NM_001000565 XM_345383
VERSION     NM_001000565.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Aug 30, 2004 this sequence version replaced XM_345383.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000003.1  92684876-92685814   c
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..939
                     /gene="Or5aq6"
                     /gene_synonym="Olr541"
                     /note="olfactory receptor family 5 subfamily AQ member 6"
                     /db_xref="GeneID:366104"
                     /db_xref="RGD:1332637"
     CDS             1..939
                     /gene="Or5aq6"
                     /gene_synonym="Olr541"
                     /note="olfactory receptor gene Olr541; olfactory receptor
                     541"
                     /codon_start=1
                     /product="olfactory receptor Olr541"
                     /protein_id="NP_001000565.1"
                     /db_xref="GeneID:366104"
                     /db_xref="RGD:1332637"
                     /translation="MDAGNHTDVKEFILLGLTENPNWQVPLFLLFSIIYLIILLGNCG
                     MIFLIWLNTHLHTPMYFFLSNLSFCDICYSTVIAPKMLINILSEHKSSKLFSCVLQSF
                     FFMVYATTEVILLSMMAYDRYVAIANPLMYTVIMTFSICINMVLACYLCGLINSLTHT
                     ISLLRLYFCGPNIVNHFFCDIPPLLKLSCSDAHINEMLLLVFSGVIAIFTFIIVMVSY
                     IHIIIAILRIRSTEGRLKAFSTCASHLTAVTLFYGSGSFSYIQPSSQYSMEQEKVSAV
                     FYTLVIPMLNPLIYSLRNKDVKEAAIRLTCGWRNTS"
     exon            1..939
                     /gene="Or5aq6"
                     /gene_synonym="Olr541"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggatgcag gaaatcatac agatgtgaag gaattcatac tccttggctt aacagaaaat
       61 cccaattggc aggttcctct gtttttgctt ttcagcataa tttatttaat cattttattg
      121 ggaaactgtg gaatgatctt cttgatctgg ttgaacaccc accttcatac cccaatgtac
      181 ttctttctta gtaacctctc cttctgtgac atctgctact ctactgttat tgctcctaaa
      241 atgcttatca atatcttatc agaacacaaa tctagtaaac tcttttcctg tgttctgcag
      301 agtttctttt ttatggttta tgcaaccaca gaagtcattc tactgtctat gatggcttat
      361 gatcgttatg tagcaatcgc aaacccctta atgtatacag ttattatgac attcagcatc
      421 tgcattaata tggtccttgc atgttactta tgtggcctca ttaattccct gactcacaca
      481 ataagtctac tgagactgta cttctgtggt cccaacattg tgaatcattt cttctgtgac
      541 attcctcctc ttttgaagct ttcatgctct gatgcacaca ttaatgagat gctacttttg
      601 gtcttctctg gagtgattgc tattttcact ttcatcattg tcatggtgtc ctatattcac
      661 attatcattg ccatcctgag aatccgttca actgagggga ggctcaaagc tttctccact
      721 tgtgcctcac acttgacagc tgtgacatta ttttatggtt ctgggtcatt tagctatatc
      781 cagccaagct ctcagtactc catggaacag gaaaaagtct ctgctgtgtt ttacaccttg
      841 gtcatcccca tgttgaatcc tctgatttac agcttgagga acaaggatgt gaaggaagca
      901 gcaataaggt tgacttgtgg atggagaaac acttcttga
//
