LOCUS       NM_001000305             942 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 5 subfamily AL member
            5B (Or5al5b), mRNA.
ACCESSION   NM_001000305 XM_230095
VERSION     NM_001000305.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Aug 30, 2004 this sequence version replaced XM_230095.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-942               JAXUCZ010000003.1  91544225-91545166   c
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..942
                     /gene="Or5al5b"
                     /gene_synonym="Olr479; ratchr3-69206521-69205580_ORF"
                     /note="olfactory receptor family 5 subfamily AL member 5B"
                     /db_xref="GeneID:295748"
                     /db_xref="RGD:1334269"
     CDS             1..942
                     /gene="Or5al5b"
                     /gene_synonym="Olr479; ratchr3-69206521-69205580_ORF"
                     /note="olfactory receptor gene Olr479; olfactory receptor
                     479"
                     /codon_start=1
                     /product="olfactory receptor Olr479"
                     /protein_id="NP_001000305.1"
                     /db_xref="GeneID:295748"
                     /db_xref="RGD:1334269"
                     /translation="MADGNISAVSQFIFVGLTDDPGLEIILFAVFLVIYLTTVSGNLG
                     LIMLIHYSPQLHTPMYFFLSHLAFVDFCYTSSVTPNTIINFLRKVKSITFYACATQVC
                     CFITFAVCEMYLLSVMAYDRYVAIWNPLLYAVLMPRRLCLQVIASTYIYGFTVDLVQA
                     VATFHLSFCGSNVVNHFYCDDVPLVALACSDTHVKELMLLIIAGFNTLCSLLIVIISY
                     VFIVFAILRMHSAEGRRKAFSTCASHLTSITIFYGTIIFMYLQPKSSHSLNTDKFASV
                     FYVVVIPMLNPLIYSLRNQEVKSALKRITDKLSLIIR"
     exon            1..942
                     /gene="Or5al5b"
                     /gene_synonym="Olr479; ratchr3-69206521-69205580_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggctgacg gtaacatttc agcagtgtct cagttcatct ttgtaggact gacagatgac
       61 ccaggacttg agatcatcct ctttgctgtg tttctagtca tttacttaac tactgtctcg
      121 gggaatcttg gattgattat gttaatccac tacagccctc agcttcatac acccatgtac
      181 tttttcctca gtcacttggc ttttgttgat ttctgttata catcctcagt tactccaaac
      241 acaattataa acttccttcg aaaagtcaaa agtataacct tctatgcatg tgccactcag
      301 gtgtgctgtt tcatcacatt tgctgtttgt gaaatgtact tgctgtcagt catggcctat
      361 gacaggtatg tggccatctg gaaccctctc ctctatgcgg tcctcatgcc tagaaggctc
      421 tgtcttcagg tcatcgccag cacatacatt tatggattca ctgtggacct tgttcaggca
      481 gtggcaacct tccacctgtc tttttgtggc tccaatgtag ttaaccactt ctactgtgat
      541 gatgttccct tggttgctct ggcctgttct gatacgcatg tcaaagagtt gatgttgcta
      601 atcattgctg gcttcaacac cctttgctct ctgttgattg tgatcatttc ttatgttttc
      661 attgtctttg ccatcctgag aatgcattct gctgaaggaa gaaggaaagc cttttccacc
      721 tgtgcatccc acctgacttc tattaccata ttttatggaa caattatttt tatgtacctg
      781 cagcccaagt caagccattc tctgaacaca gataaatttg cttctgtgtt ttatgtggta
      841 gtaattccca tgttaaaccc actgatctac agcttgagaa atcaggaggt aaaaagtgcc
      901 ctaaagagaa ttactgacaa gttgtctttg atcattaggt aa
//
