LOCUS       NM_001000549             939 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 56 subfamily A member 5
            (Or56a5), mRNA.
ACCESSION   NM_001000549 XM_344939
VERSION     NM_001000549.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 30, 2004 this sequence version replaced XM_344939.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000001.1  168912530-168913468 c
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..939
                     /gene="Or56a5"
                     /gene_synonym="Olr192; ratchr1-162978233-162977295_ORF"
                     /note="olfactory receptor family 56 subfamily A member 5"
                     /db_xref="GeneID:365336"
                     /db_xref="RGD:1332789"
     CDS             1..939
                     /gene="Or56a5"
                     /gene_synonym="Olr192; ratchr1-162978233-162977295_ORF"
                     /note="olfactory receptor gene Olr192; olfactory receptor
                     192"
                     /codon_start=1
                     /product="olfactory receptor Olr192"
                     /protein_id="NP_001000549.1"
                     /db_xref="GeneID:365336"
                     /db_xref="RGD:1332789"
                     /translation="MEAQSNISSILVPDFLLICFPNYQTWQHWLSLPLSLLFLLAMGA
                     NATLLITIRMEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSACFL
                     QMFVMNSFLTMESCTFMVMAYDRYVAICKPLQYPSIITDQFVVRAAIFVATRNGILTM
                     PIPIFSSQLRYCARIIKNCICTNMSVSRLSCDDITFNKLYQFVIGWTLLGSDLILIVL
                     SYSFILKAVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLARERIPPDVPI
                     LLNILHHLIPPALNPIVYGVRTREIKQGIRNLLRRF"
     exon            1..939
                     /gene="Or56a5"
                     /gene_synonym="Olr192; ratchr1-162978233-162977295_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggaagcac aaagcaatat ttcctctatc ctggtccctg acttccttct catctgcttc
       61 cccaactatc agacctggca gcattggctg tccctgcccc tcagcctcct cttcctcctg
      121 gccatggggg ccaatgccac ccttctcatc accatcagga tggaggcctc tctgcatgag
      181 cccatgtact acctgctcag ccttctgtcc ctgctagaca ttgtgctctg cctcacagtc
      241 ataccaaagg tcctggccat cttctggttt gacaataaat ccatcggctt ctctgcctgc
      301 ttcctccaga tgtttgtcat gaacagtttc ctgacgatgg agtcttgcac cttcatggtc
      361 atggcctatg accgctatgt ggccatctgt aagcctctgc agtatccgtc catcatcact
      421 gaccagtttg tggttagggc tgccatcttt gtagcaacca gaaatggtat tcttactatg
      481 cccatcccca tattttcttc ccaactgaga tattgtgcaa gaattatcaa gaactgcatc
      541 tgcactaaca tgtctgtatc cagactctcc tgtgatgaca tcacttttaa taaactgtac
      601 cagtttgtca taggttggac cctgctgggc tctgacctca tcctcattgt cctatcttat
      661 tctttcattc tgaaggctgt gctcaggatc aaagcagagg gagctgtggc caaggccctg
      721 agcacatgtg gttcccactt catcctcatt ctcttcttca gcacagtcct gttggtgctg
      781 gtcatcacta acctggccag ggagaggatt cctccggatg tccccatcct gctcaatata
      841 cttcatcacc tcatcccccc agctctgaat cccattgttt atggggtgag aaccagggag
      901 attaagcagg gaataaggaa cctgcttagg aggttctaa
//
