LOCUS       NM_001000127             951 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 55 subfamily B member
            10 (Or55b10), mRNA.
ACCESSION   NM_001000127 XM_219015
VERSION     NM_001000127.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 951)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 30, 2004 this sequence version replaced XM_219015.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-951               JAXUCZ010000001.1  166296085-166297035 c
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..951
                     /gene="Or55b10"
                     /gene_synonym="Olr40; ratchr1-160170992-160170042_ORF"
                     /note="olfactory receptor family 55 subfamily B member 10"
                     /db_xref="GeneID:293197"
                     /db_xref="RGD:1334204"
     CDS             1..951
                     /gene="Or55b10"
                     /gene_synonym="Olr40; ratchr1-160170992-160170042_ORF"
                     /note="olfactory receptor gene Olr40; olfactory receptor
                     40"
                     /codon_start=1
                     /product="olfactory receptor Olr40"
                     /protein_id="NP_001000127.1"
                     /db_xref="GeneID:293197"
                     /db_xref="RGD:1334204"
                     /translation="MSGWSNGTYNESYTSFLLIGFPGIQEARALLMLPFLSLYLVILF
                     TNALVIHTVASQRSLHQPMYLLIALLLAINICAATTVLPAMLFSFSTSFNRISLPRCL
                     GQMFCIYFLVSMDCNILLVMALDRYVAICYPLRYPEIVTGQLLAGLVVVAVTRSTCIV
                     APVVVLASRVRFCRSDVIHHFACEHMALMKLSCGDTSLNKTVGLIIRTFNRVLDMLLL
                     GASYSRIIHAAFRISSGGARSKALNTCGSHLLVIFTVYSSTMSSSIVYRVARTASQDV
                     HNLLSAFYLLLPCLVNPIIYGARTKEIRQHLVRSFLSAGP"
     exon            1..951
                     /gene="Or55b10"
                     /gene_synonym="Olr40; ratchr1-160170992-160170042_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtcagggt ggagcaatgg cacctacaat gaatcctaca ccagcttcct cctcataggc
       61 ttcccaggga ttcaggaagc cagagccctc ctgatgctgc ccttcctcag cctctacctg
      121 gtgatcctct tcaccaacgc cctggtcatc cacacggtgg catcccagcg cagcctgcac
      181 cagcccatgt acctgctcat cgccctgctc ctggctatca atatctgtgc tgccaccacg
      241 gtgctgcccg ccatgctctt cagcttctcc acaagtttca accgcatctc tctccctcga
      301 tgcttgggac agatgttctg catctacttc ctggtttcta tggattgcaa catcctcctt
      361 gtcatggcct tggaccgcta tgtggctatc tgctatcctc tccgctaccc agagatagtg
      421 acaggacagt tactggctgg tctggtggtg gtggcagtca ccaggagtac atgcatcgta
      481 gctccagtgg tggtgctggc ctcgcgggtc cgcttctgcc gctcagatgt gatccaccac
      541 tttgcctgtg aacacatggc cctcatgaag ctctcctgtg gagatacctc actgaataag
      601 actgtgggac tcattattcg aacctttaac agagtcctgg atatgctcct gctgggcgcc
      661 tcctactccc gcatcatcca tgctgccttc aggatctcat caggaggagc gcggtccaaa
      721 gctctcaaca cctgtggctc ccaccttctg gtcatcttca ccgtctactc ctccaccatg
      781 tcctcatcca ttgtctaccg tgtggcccgc actgcctccc aagatgtgca caacctgctc
      841 agtgctttct acctgttgct tccgtgtctg gtcaacccca tcatctatgg ggccagaacc
      901 aaggaaatca ggcagcacct ggtaaggtca ttcctgagtg caggcccgtg a
//
