LOCUS       NM_001000172             969 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 52 subfamily N member
            4E (Or52n4e), mRNA.
ACCESSION   NM_001000172 XM_219064
VERSION     NM_001000172.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 969)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 30, 2004 this sequence version replaced XM_219064.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-969               JAXUCZ010000001.1  168454765-168455733 c
FEATURES             Location/Qualifiers
     source          1..969
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..969
                     /gene="Or52n4e"
                     /gene_synonym="Olr165; ratchr1-162516654-162515686_ORF"
                     /note="olfactory receptor family 52 subfamily N member 4E"
                     /db_xref="GeneID:293312"
                     /db_xref="RGD:1332871"
     CDS             1..969
                     /gene="Or52n4e"
                     /gene_synonym="Olr165; ratchr1-162516654-162515686_ORF"
                     /note="olfactory receptor gene Olr165; olfactory receptor
                     52N4-like; olfactory receptor 165"
                     /codon_start=1
                     /product="olfactory receptor Olr165"
                     /protein_id="NP_001000172.1"
                     /db_xref="GeneID:293312"
                     /db_xref="RGD:1332871"
                     /translation="MSVQNNTDLTPASFVLNGIPGLEDMHIWISFPFCSMYAVAMMGN
                     CGLLYLIFFEDSLHRPMYYFLAILSLTDLVMCLSAIPKALCIFWFHQKEIGFDDCLVQ
                     MFFTHTFTLMESGVLMLMALDRYIAICYPLRYSTILTNAIIAKIGFATYLRGALLIIP
                     IIFVIKYLPYCRGNIINHTYCDHMSVAKLSCGNVKVNAIYGLMVALLIGGFDILCITV
                     SYTMILRTVVSLSSADARQKAFSTCTAHICAIVFSYSPAFFSFFSHHFGGHTIPPSCH
                     IIVANIYLLLPPTMNPIVYGVKTKQIRDCVIRIFQGRRISKLTVCK"
     exon            1..969
                     /gene="Or52n4e"
                     /gene_synonym="Olr165; ratchr1-162516654-162515686_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtcagtgc agaataacac agatctgact ccagcttcct ttgttctgaa tgggatcccc
       61 ggcttggaag acatgcacat ctggatttcc ttcccattct gttccatgta tgcagtggct
      121 atgatgggga actgtggact gctctatctc atcttctttg aggactcctt acatagaccc
      181 atgtactact ttttagcaat actttctcta acggaccttg tcatgtgctt aagtgcaata
      241 cctaaagccc tctgcatctt ctggtttcat caaaaagaaa ttggatttga tgactgtctt
      301 gtacagatgt tctttaccca taccttcacg ctgatggagt ctggggttct catgctcatg
      361 gctctggatc gctacatagc catctgctac cctctgcgtt actccaccat tctcaccaat
      421 gccatcattg ccaagattgg gtttgccacc tacctcagag gggcactgct aattattcca
      481 attatatttg ttatcaagta cctaccctac tgccgaggca atataataaa ccatacctac
      541 tgtgaccaca tgtccgtagc caagttgtcc tgtggcaatg tcaaggtgaa tgccatttat
      601 ggcctgatgg ttgctctctt gattgggggc tttgacattc tgtgcatcac agtctcctac
      661 accatgatcc ttaggacagt ggtcagctta tcctcagcag atgctaggca gaaagccttc
      721 agcacctgca ctgcccacat ctgtgccatt gttttctcct atagcccagc cttcttttcc
      781 tttttttccc accactttgg gggacatacc atccctccat cttgccacat cattgtggct
      841 aatatttatc tgcttttgcc tcccactatg aatcctattg tctatggagt gaaaacgaag
      901 caaatacgag actgtgtcat aaggatcttt cagggtcgaa ggatttcaaa gctcacagta
      961 tgtaaatga
//
