LOCUS       NM_001000178             957 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 52 subfamily N member
            2E (Or52n2e), mRNA.
ACCESSION   NM_001000178 XM_219073
VERSION     NM_001000178.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 957)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 30, 2004 this sequence version replaced XM_219073.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-957               JAXUCZ010000001.1  168668430-168669386 c
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..957
                     /gene="Or52n2e"
                     /gene_synonym="Olr176; ratchr1-162722557-162721601_ORF"
                     /note="olfactory receptor family 52 subfamily N member 2E"
                     /db_xref="GeneID:293321"
                     /db_xref="RGD:1332638"
     CDS             1..957
                     /gene="Or52n2e"
                     /gene_synonym="Olr176; ratchr1-162722557-162721601_ORF"
                     /note="olfactory receptor gene Olr176; olfactory receptor
                     176"
                     /codon_start=1
                     /product="olfactory receptor Olr176"
                     /protein_id="NP_001000178.1"
                     /db_xref="GeneID:293321"
                     /db_xref="RGD:1332638"
                     /translation="MSGSNSSSLIPEFFILNGVPGLEDAHVWISLPFCFMYMIAVVGN
                     CGLIYLIGHEEALHRPMYYFLALLSFTDVTWCTTTVPNMLCIFWFNFKKIGFNSCLVQ
                     MFFVHMLTGMESGVLMLMALDRYVAICYPLRYTSILTNPVIAKAGLATFMRSVMLIFP
                     FTLLTKRLPYCRGTLIPHTYCDHMSVAKVSCGNAKVNAIYGLMVALLIGVFDICCISV
                     SYTMILRAVVSLSSADARHKAFSTCTSHICAIVITYVPAFFTFFTHRFGGNTIPHHIH
                     IIVANLYLLLPPTMNPIVYGVKTKQIRESVIKFLLGDKISNT"
     exon            1..957
                     /gene="Or52n2e"
                     /gene_synonym="Olr176; ratchr1-162722557-162721601_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtctggat ccaacagctc cagcctgatc ccagaattct ttatcctcaa tggtgttcct
       61 gggctggaag atgcacatgt ctggatctct ctgccattct gcttcatgta catgattgct
      121 gtggtgggga actgtgggct tatctacctc attggccatg aggaggctct gcacagaccc
      181 atgtactact tcctggcctt actctccttc actgatgtta cctggtgtac taccactgtg
      241 cccaatatgc tgtgcatatt ctggttcaac tttaagaaga tcggatttaa ttcctgcctt
      301 gtccagatgt tctttgtcca catgttgact ggaatggagt ctggtgtgct catgctgatg
      361 gccctggacc gctatgtagc catctgctat cctcttcgat atacctccat cctcaccaac
      421 cctgtgattg ccaaggctgg gcttgctaca ttcatgagga gtgtcatgct catctttcca
      481 ttcactctcc tcaccaagcg cttgccctat tgcagaggca cccttatccc ccacacttac
      541 tgtgatcaca tgtctgtggc taaggtatcc tgtggcaatg ccaaggtcaa cgcaatatat
      601 ggcctcatgg ttgctctgtt gattggtgtg tttgacattt gctgtatctc tgtgtcttac
      661 actatgatac tgagggcagt ggtgagtctg tcctctgctg atgctcgtca caaggccttc
      721 agcacctgca catctcatat ctgtgctatt gtgatcactt atgtgcctgc ctttttcact
      781 ttctttactc atcgttttgg aggaaacact attccccacc acatccacat catagtggcc
      841 aacctctacc tgctcttgcc ccctaccatg aacccaattg tttatggagt caagaccaag
      901 cagattcggg aaagtgtaat caagttttta cttggagaca aaataagcaa tacctaa
//
