LOCUS       NM_001000187             951 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 52 subfamily L member 1
            (Or52l1), mRNA.
ACCESSION   NM_001000187 XM_219092
VERSION     NM_001000187.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 30, 2004 this sequence version replaced XM_219092.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-951               JAXUCZ010000001.1  168994381-168995331 c
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..951
                     /gene="Or52l1"
                     /gene_synonym="Olr196; ratchr1-163062782-163061832_ORF"
                     /note="olfactory receptor family 52 subfamily L member 1"
                     /db_xref="GeneID:293338"
                     /db_xref="RGD:1332776"
     CDS             1..951
                     /gene="Or52l1"
                     /gene_synonym="Olr196; ratchr1-163062782-163061832_ORF"
                     /note="olfactory receptor gene Olr196; olfactory receptor
                     196"
                     /codon_start=1
                     /product="olfactory receptor Olr196"
                     /protein_id="NP_001000187.1"
                     /db_xref="GeneID:293338"
                     /db_xref="RGD:1332776"
                     /translation="MALSNSSWRQPQPPFFLVGVPGLEESQHWIALPLGVLYLLALVG
                     NVTIIFIIWTDSSLHQPMYLFLAMLAAIDLVLASSTAPKALTVLLAHAHEIGYIVCLT
                     QMFFIHAFSSMESGILVAMALDRYVAICHPLHHSTILHPGIIGRIGMVVLVRGLVLLV
                     PFPILLQKVVFCRATVISHAYCEHMAVVKLACSETTVNRAYGLSVALLVVGLDVLAIS
                     ISYALILQAVLKVPGGEARLKAFSTCGSHVCVILIFYVPGMFSFLTHRFGHHVPHHVH
                     VLLATLYLLVPPALNPLVYGVKTRQIRQRVLRVFYTKASS"
     exon            1..951
                     /gene="Or52l1"
                     /gene_synonym="Olr196; ratchr1-163062782-163061832_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggctctta gcaactccag ctggaggcaa ccccagcccc ctttcttcct agtaggtgtt
       61 ccgggcttgg aggaaagtca gcactggata gcattgcctc tgggggtcct ttacctcctt
      121 gctctagtgg gcaatgtgac aattatcttc attatctgga ctgactcatc cttgcaccaa
      181 cctatgtacc tcttcctggc catgcttgct gctattgatc tggtcctggc ctcctccact
      241 gcgcctaaag ctctcactgt gcttctggct cacgcccatg agattgggta cattgtctgc
      301 ctcactcaga tgtttttcat tcatgccttc tcctcgatgg agtcaggcat acttgtggcc
      361 atggctctgg atcgctatgt tgccatctgc caccctctgc atcattctac catcctgcat
      421 ccggggatta ttgggcgcat cgggatggtg gtgctggtgc ggggattggt cctccttgtc
      481 ccattcccca tcctgttgca gaaagttgtc ttctgcagag ccactgtcat aagccatgcc
      541 tattgtgaac atatggctgt ggtaaaactt gcctgttcgg aaaccacagt gaatcgagct
      601 tatgggctgt cagtggcact gctggtggtt gggctagatg tcctggccat tagcatttcc
      661 tatgccctca tcctccaggc agtgctgaag gttccaggag gtgaagccag acttaaggcc
      721 ttcagcacat gtggatctca tgtttgtgtt attctcatct tctatgtccc tggaatgttc
      781 tccttcctca ctcaccgctt tggccaccat gttccccatc atgtccacgt tctgctggcc
      841 actctctatc tccttgtgcc acctgccctc aatcctcttg tttatggggt gaagactcga
      901 cagatccgcc agcgagtgct cagggtgttc tacacaaaag catcgagttg a
//
