LOCUS       NM_001000136             939 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 52 subfamily J member 3
            (Or52j3), mRNA.
ACCESSION   NM_001000136 XM_219123
VERSION     NM_001000136.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 939)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 30, 2004 this sequence version replaced XM_219123.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: This record was generated from the set of rat
            olfactory receptors mined from Rnor3.1 assembly (NCBI Build 2.1).
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-939               JAXUCZ010000001.1  167017079-167018017
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..939
                     /gene="Or52j3"
                     /gene_synonym="Olr83; ratchr1-161034757-161035695_ORF"
                     /note="olfactory receptor family 52 subfamily J member 3"
                     /db_xref="GeneID:293226"
                     /db_xref="RGD:1333934"
     CDS             1..939
                     /gene="Or52j3"
                     /gene_synonym="Olr83; ratchr1-161034757-161035695_ORF"
                     /note="olfactory receptor gene Olr83; olfactory receptor
                     83"
                     /codon_start=1
                     /product="olfactory receptor Olr83"
                     /protein_id="NP_001000136.1"
                     /db_xref="GeneID:293226"
                     /db_xref="RGD:1333934"
                     /translation="MTIQSNRSVFHPATFFLIGIPGLEEIHAWISLPFCCIYLVALVG
                     NTMILVVIKTGRSLREPMFYFLAILSSVDLALSTTSVPRMLGIFWFDAHEINFGGCVA
                     QMFLIHALTGMEAEVLMAMAFDRYLAICVPLHYTTILTSRVLMGISICVVVRPALFIC
                     PMIYLIYRLPFCQAHVIAHSYCEHMGIAKLSCGNIHINAVYGLFVVSLFLLNLVLIGI
                     SYGYILRAVFRLPSHDARLKALSTCGSHVAVLCVFYIPSVFSFLTHRFGHNIPHYIHI
                     LVANLYVVIPPFLNPIIYGVRTKQIRERVLHIFTKR"
     exon            1..939
                     /gene="Or52j3"
                     /gene_synonym="Olr83; ratchr1-161034757-161035695_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgacaatcc agagtaacag gagtgttttt cacccagcta catttttcct cattgggatc
       61 ccaggtctgg aggaaatcca tgcttggatc tctctgcctt tctgctgtat ttatcttgtg
      121 gccctagtgg gaaataccat gatcctggta gttatcaaga cagggcgttc tctccgagag
      181 cccatgttct acttcctggc catcctttct tcagtcgact tggctctttc tacaacttct
      241 gtgccccgta tgcttggcat attttggttt gatgcccatg aaataaactt tggtggctgt
      301 gtggctcaga tgtttttgat ccatgccctc actggcatgg aggctgaggt tctcatggcc
      361 atggcttttg accgttattt agccatctgt gttccactcc actacacaac catcttgaca
      421 tctcgtgtcc tgatgggcat cagtatatgt gtggtagttc gtccagcctt gtttatatgt
      481 ccaatgattt atctcattta ccgcttaccc ttttgtcaag ctcatgtaat agcacattcc
      541 tattgtgaac acatgggtat tgccaaactg tcctgtggga acatccatat caatgctgtg
      601 tatggcctct ttgtggtctc tctctttctt ttgaacttgg tacttattgg catctcatat
      661 gggtacattc ttcgtgctgt gttccgcctt ccatctcatg atgcacggtt aaaagccctc
      721 agcacatgtg gttcccatgt ggctgttctc tgtgttttct acatcccatc agtcttctct
      781 ttcctcactc atcggtttgg acacaacatt ccacattaca ttcacattct tgttgccaac
      841 ctctatgtgg tcattcctcc ctttctcaat cccatcattt atggtgtgag aacaaagcag
      901 ataagagagc gtgttctcca catattcact aaaaggtaa
//
