LOCUS       NM_001000184             942 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 52 subfamily E member
            5B (Or52e5b), mRNA.
ACCESSION   NM_001000184 XM_219087
VERSION     NM_001000184.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 30, 2004 this sequence version replaced XM_219087.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR22582416.284433.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-942               JAXUCZ010000001.1  168873746-168874687
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..942
                     /gene="Or52e5b"
                     /gene_synonym="Olr189; ratchr1-162938513-162939454_ORF"
                     /note="olfactory receptor family 52 subfamily E member 5B"
                     /db_xref="GeneID:293333"
                     /db_xref="RGD:1333390"
     CDS             1..942
                     /gene="Or52e5b"
                     /gene_synonym="Olr189; ratchr1-162938513-162939454_ORF"
                     /note="olfactory receptor gene Olr189; olfactory receptor
                     189"
                     /codon_start=1
                     /product="olfactory receptor Olr189"
                     /protein_id="NP_001000184.1"
                     /db_xref="GeneID:293333"
                     /db_xref="RGD:1333390"
                     /translation="MLHSNKTQFHPSSFLLIGIPGLEDLHLWIGFPFFAAYLIAVLGN
                     TIILFVIQTEHSLHQPMFYFLAMLACTDLGLSTATIPKMLGIFWFNLGEITFGACITQ
                     MYTIHLCTGLESVVLTVMAIDRYVAICNPLRYSMILTNKVIAILGVLIIVRTLVFVTP
                     FIFLIFRLPFCGVRIVPHTYCEHMGLAKLACANIRVNVIYGLVAFSVGYIDLSVIGFS
                     YIRILQAVFRLPSWDARLKALSTCGSHVSVMLAFYLPALFSFMTHRFGHNIPHYIHIL
                     LANLYVVVPPALNPVIYGVRTKQIRERVVRMLNPKMH"
     exon            1..942
                     /gene="Or52e5b"
                     /gene_synonym="Olr189; ratchr1-162938513-162939454_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgcttcatt ccaacaagac acagttccac ccttcctcct tcctcctgat agggatccca
       61 gggctggaag atttgcacct ttggatcggc tttcccttct ttgcagcgta tctgatagcc
      121 gtcttgggga acaccatcat cttatttgtg atccaaactg aacacagcct ccaccaacct
      181 atgttctact ttctggccat gttggcatgc accgatttgg gtttatccac agccaccatc
      241 cccaagatgc tgggcatttt ctggttcaat ctcggggaga ttacatttgg agcctgcatc
      301 actcagatgt ataccatcca cctatgcacc ggcctggaat ctgtggtgct gacagttatg
      361 gccatagatc gttatgttgc tatatgtaac ccactgaggt acagcatgat cctcaccaac
      421 aaggtgatag ctattctggg tgtactcatc atagtcagaa ctttggtatt tgtgactccg
      481 tttatatttc tcatctttag gttgcctttc tgtggtgtcc gaattgtccc acatacctac
      541 tgtgaacaca tgggtttggc aaagctagct tgtgctaata tcagggtcaa tgttatctat
      601 ggattggttg ctttctcagt gggatacatt gatctatctg tgattggatt ttcctacatc
      661 cggattctcc aagcagtctt ccgccttcca tcctgggatg ctcggcttaa ggcacttagc
      721 acatgtggct cccatgtgag tgtcatgttg gccttttacc tgccagctct cttctcattc
      781 atgacacacc gctttggcca caacatccct cactatatcc acatacttct agccaatctg
      841 tatgtggtcg ttcctcctgc cctgaaccct gttatctatg gagtcaggac taaacagata
      901 agggagagag tagtaagaat gcttaaccct aagatgcact ga
//
