LOCUS       NM_001408737             992 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 4 subfamily N member 4
            (Or4n4), mRNA.
ACCESSION   NM_001408737 XM_003751458
VERSION     NM_001408737.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 992)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 992)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000015.1.
            
            On Jun 23, 2022 this sequence version replaced XM_003751458.4.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-992               JAXUCZ010000015.1  25968149-25969140
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p14"
     gene            1..992
                     /gene="Or4n4"
                     /gene_synonym="Olfr733; Olr1611;
                     ratchr15-26035847-26036773_ORF"
                     /note="olfactory receptor family 4 subfamily N member 4"
                     /db_xref="GeneID:290009"
                     /db_xref="RGD:1333578"
     exon            1..992
                     /gene="Or4n4"
                     /gene_synonym="Olfr733; Olr1611;
                     ratchr15-26035847-26036773_ORF"
                     /inference="alignment:Splign:2.1.0"
     CDS             24..950
                     /gene="Or4n4"
                     /gene_synonym="Olfr733; Olr1611;
                     ratchr15-26035847-26036773_ORF"
                     /note="olfactory receptor 1611; olfactory receptor gene
                     Olr1611; olfactory receptor 733; olfactory receptor 4N2;
                     olfactory receptor 4N4"
                     /codon_start=1
                     /product="olfactory receptor Olr1611"
                     /protein_id="NP_001395666.1"
                     /db_xref="GeneID:290009"
                     /db_xref="RGD:1333578"
                     /translation="METENRTVVTEFILIGLTQSHDIQRLVFVLSLIFYIIILPGNVF
                     IILTIISDPGLTAPLYLFLGNLAFLDASYSFIVAPRMLVDIFSEKKIISYKACITQLF
                     FLHFLGGGEFLLLVVMAFDRYIAICRPLHYSTVMSSRTCYVMLLAPWLGGLVHSIIQV
                     VFILHLPFCGPNHLDNFFCDVPQVIKLACTDTFAVELLMIFNSGLLTLVCFLGLLTSY
                     AVILCHVHRSASEGKNKAISTCTTHVIIIFLMFGPAIFIYTRPFTALSADKVVSFFHT
                     VIFPLLNPVIYTLRNQEVKTSMKKLFIRQIIC"
ORIGIN      
        1 ttaatgtcgt gtagggactg gtgatggaga cagaaaacag gacagttgtc acagaattca
       61 tcctcatagg actgacccag tcacatgaca ttcagcgctt ggtctttgtt ctgagcttaa
      121 ttttctacat catcatcttg cctggaaatg tcttcatcat cctcaccatc atatcagacc
      181 ctggactcac tgctcctctt tatctcttcc tgggaaattt ggccttcctg gatgcctcct
      241 actccttcat tgtggctccc aggatgctgg tagacatctt ctctgagaag aagataatct
      301 cctacaaagc ttgtatcact caactatttt ttttgcactt cctcggagga ggggaatttt
      361 tactactggt tgtgatggcc tttgaccgct acatcgccat ctgcaggcct ttacattact
      421 ccactgtcat gagttccaga acctgctatg tgatgttgtt ggctccatgg cttggaggtt
      481 tggttcactc catcattcag gttgtcttca tcctccactt gcccttctgt gggccgaatc
      541 atctagataa cttcttctgt gatgtcccac aggtcatcaa gctagcctgt acagacacct
      601 ttgcagttga gctcctaatg atcttcaata gtggcctgct taccctcgtg tgcttccttg
      661 gtcttctgac ttcctatgca gttattttat gccatgtcca taggtcagct tctgagggaa
      721 aaaacaaagc tatatctacg tgtaccactc atgttatcat tatatttctt atgtttggac
      781 ctgcaatttt tatttataca cgtccattca cagccttatc agctgacaaa gtggtttctt
      841 tcttccatac agtaatattt cccttattga atcctgtgat ttatacgctt cggaaccagg
      901 aagttaaaac atccatgaaa aagttattta ttcgtcaaat aatttgttaa ttgtttttta
      961 atgagaaatc aggcaggtgt aatttggtat gg
//
