LOCUS       NM_001000607             927 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 4 subfamily F member 56
            (Or4f56), mRNA.
ACCESSION   NM_001000607
VERSION     NM_001000607.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 927)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-927               JAXUCZ010000003.1  118958815-118959741 c
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q34"
     gene            1..927
                     /gene="Or4f56"
                     /gene_synonym="Olr778"
                     /note="olfactory receptor family 4 subfamily F member 56"
                     /db_xref="GeneID:404796"
                     /db_xref="RGD:1333821"
     CDS             1..927
                     /gene="Or4f56"
                     /gene_synonym="Olr778"
                     /note="olfactory receptor gene Olr778; olfactory receptor
                     778"
                     /codon_start=1
                     /product="olfactory receptor Olr778"
                     /protein_id="NP_001000607.1"
                     /db_xref="GeneID:404796"
                     /db_xref="RGD:1333821"
                     /translation="MFGANHSAVSEFVLLGLSNSWEAQIFLFFFSCLFYVSSLTGNFI
                     IVVTVTSDPYLHSPMYFLLANLSVIDLIFCSIAAPKMICDLFRKQKVISFGGCISQVF
                     FSHAVGGTEMVLLIAMAFDRYVAICKPLHYLSIMSPRMCLLILVAAWIIGLIHSSTQL
                     AFVINLPFCGPNILDSFYCDIPRLIKLACTDTYKLEFMIAANSGFISLIAFFLLIISY
                     VFLLNTVQKQSSGCSSKALSTLLAHIIVVVLFFGPLIFFYVWPAPSTHVDKFLAIFDA
                     VLTPFLNPVIYTLRNRDMKIAIRKVFCQRLAL"
     exon            1..927
                     /gene="Or4f56"
                     /gene_synonym="Olr778"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtttggag caaaccattc tgcagtgtct gaatttgtgc tgttggggct ttcaaattcc
       61 tgggaggccc agattttcct ttttttcttt tcttgtctgt tctatgtgtc cagtttgaca
      121 gggaacttca tcatagttgt tacagtcacc tctgacccgt acctgcattc acccatgtac
      181 tttctactgg ctaatctctc tgttattgat cttatatttt gttccattgc agcccccaaa
      241 atgatttgtg atcttttcag aaagcagaaa gtcatctctt ttggaggctg tatcagtcag
      301 gtcttcttta gtcatgctgt tggaggcact gagatggtac tgctcatagc catggccttt
      361 gacaggtatg tggccatatg caaaccttta cattatctga gcatcatgag cccacgaatg
      421 tgcctattaa tattagttgc tgcttggatc attggcctca tccattcatc aacccagttg
      481 gcttttgtta taaacttgcc attctgtggc cctaacatac tagacagctt ttactgtgac
      541 ataccacgac tcatcaagct tgcatgcaca gatacttata aactggagtt catgattgct
      601 gccaatagtg ggttcatttc cttgattgca ttctttttac tcatcatctc ctatgtcttt
      661 ctcctcaaca ctgtccagaa gcagtcctca ggatgttcat ctaaggccct ttctactctt
      721 ttggctcata ttatagtcgt agttttgttt tttggcccat tgattttttt ctatgtgtgg
      781 cctgctcctt caacacatgt agataaattt ctagctatat ttgatgcagt tttgaccccc
      841 tttctaaatc cagttatcta tacattgagg aacagagata tgaagattgc catcaggaaa
      901 gtgttttgtc agcgcttggc tttatag
//
