LOCUS       NM_001000481             945 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 4 subfamily D member 5
            (Or4d5), mRNA.
ACCESSION   NM_001000481 XM_236173
VERSION     NM_001000481.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 945)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Aug 30, 2004 this sequence version replaced XM_236173.2.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-945               JAXUCZ010000008.1  49321020-49321964   c
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q22"
     gene            1..945
                     /gene="Or4d5"
                     /gene_synonym="Olr1339; ratchr8-43030000-43029056_ORF"
                     /note="olfactory receptor family 4 subfamily D member 5"
                     /db_xref="GeneID:300639"
                     /db_xref="RGD:1332863"
     CDS             1..945
                     /gene="Or4d5"
                     /gene_synonym="Olr1339; ratchr8-43030000-43029056_ORF"
                     /note="olfactory receptor gene Olr1339; olfactory receptor
                     1339"
                     /codon_start=1
                     /product="olfactory receptor Olr1339"
                     /protein_id="NP_001000481.1"
                     /db_xref="GeneID:300639"
                     /db_xref="RGD:1332863"
                     /translation="MNPANHSQVATFVLLGLSQVWELRLLFFTVFSAVYLLTVAGNLL
                     IVAIVTSDPRLHTTMYFLLGNLSFLDFCYSSITAPRMLVDLLSHNPTISFGACLTQLF
                     FFHFIGGIKIFLLTVMAYDRYIAICQPLRYTVIMNQTVCGLFMGASWVGGFIHSIVQI
                     GLTIHLPFCGPDKLDNFYCDVPQLIKLACTDTFVLELLMVSNNGLVTLMCFLVLLGPY
                     TALLVMLRSHSKEGRSKALSTCASHIAVVTIIFVPCIYIYARPFRTFPMDKAVSVLYT
                     MVTPMLNPAIYTLRNKEVIAAMKKLWRRQKDFLGPSDH"
     exon            1..945
                     /gene="Or4d5"
                     /gene_synonym="Olr1339; ratchr8-43030000-43029056_ORF"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaacccag caaaccattc ccaggtggca acgttcgtcc tcctggggct ctctcaggta
       61 tgggagcttc ggctcctgtt cttcactgtt ttctcagccg tgtatctttt gactgtcgct
      121 ggcaatcttc tcattgtggc catagtgacc tccgacccgc gcttgcacac aactatgtat
      181 tttctcttag gcaacctttc attcttggac ttctgctact cttctatcac tgcccccagg
      241 atgctggttg acttgctctc acacaacccc accatttcct ttggtgcctg cctgactcag
      301 ctgttctttt tccacttcat tggaggcatc aagatattcc tgctgactgt catggcatat
      361 gaccgttaca ttgccatttg ccagcccctc cgctacacgg taattatgaa tcagacggtc
      421 tgtgggctct tcatgggagc ctcatgggtg ggtggtttta tccattccat tgtacaaatt
      481 ggactgacta tccacctgcc attttgtggt cctgacaagc tggacaactt ctattgtgat
      541 gtgccacagc tgatcaaatt ggcctgcacc gatacctttg tcttagagct tctgatggtg
      601 tctaacaatg gcttggtcac tctcatgtgc tttctggtgc tgctgggccc ctacacagcc
      661 ctgcttgtga tgctccgaag tcactctaag gagggtcgta gcaaggccct gtctacctgt
      721 gcctctcaca ttgctgtggt gacaataatt tttgtgcctt gcatctacat ctatgcaaga
      781 ccttttagga cattccccat ggataaggca gtttctgtgc tatatacaat ggtcactccc
      841 atgctgaatc ctgccattta taccctgaga aataaagaag tgattgcagc catgaagaag
      901 ctgtggagga ggcagaagga ttttcttggt ccctcagatc attga
//
