LOCUS       NM_001000650             915 bp    mRNA    linear   ROD 24-OCT-2024
DEFINITION  Rattus norvegicus olfactory receptor family 4 subfamily C member 99
            (Or4c99), mRNA.
ACCESSION   NM_001000650
VERSION     NM_001000650.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 915)
  AUTHORS   Gibbs,R.A., Weinstock,G.M., Metzker,M.L., Muzny,D.M.,
            Sodergren,E.J., Scherer,S., Scott,G., Steffen,D., Worley,K.C.,
            Burch,P.E., Okwuonu,G., Hines,S., Lewis,L., DeRamo,C., Delgado,O.,
            Dugan-Rocha,S., Miner,G., Morgan,M., Hawes,A., Gill,R., Celera,
            Holt,R.A., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S., Evans,C.A., Ferriera,S., Fosler,C.,
            Glodek,A., Gu,Z., Jennings,D., Kraft,C.L., Nguyen,T.,
            Pfannkoch,C.M., Sitter,C., Sutton,G.G., Venter,J.C., Woodage,T.,
            Smith,D., Lee,H.M., Gustafson,E., Cahill,P., Kana,A.,
            Doucette-Stamm,L., Weinstock,K., Fechtel,K., Weiss,R.B., Dunn,D.M.,
            Green,E.D., Blakesley,R.W., Bouffard,G.G., De Jong,P.J.,
            Osoegawa,K., Zhu,B., Marra,M., Schein,J., Bosdet,I., Fjell,C.,
            Jones,S., Krzywinski,M., Mathewson,C., Siddiqui,A., Wye,N.,
            McPherson,J., Zhao,S., Fraser,C.M., Shetty,J., Shatsman,S.,
            Geer,K., Chen,Y., Abramzon,S., Nierman,W.C., Havlak,P.H., Chen,R.,
            Durbin,K.J., Simons,R., Ren,Y., Song,X.Z., Li,B., Liu,Y., Qin,X.,
            Cawley,S., Worley,K.C., Cooney,A.J., D'Souza,L.M., Martin,K.,
            Wu,J.Q., Gonzalez-Garay,M.L., Jackson,A.R., Kalafus,K.J.,
            McLeod,M.P., Milosavljevic,A., Virk,D., Volkov,A., Wheeler,D.A.,
            Zhang,Z., Bailey,J.A., Eichler,E.E., Tuzun,E., Birney,E.,
            Mongin,E., Ureta-Vidal,A., Woodwark,C., Zdobnov,E., Bork,P.,
            Suyama,M., Torrents,D., Alexandersson,M., Trask,B.J., Young,J.M.,
            Huang,H., Wang,H., Xing,H., Daniels,S., Gietzen,D., Schmidt,J.,
            Stevens,K., Vitt,U., Wingrove,J., Camara,F., Mar Alba,M.,
            Abril,J.F., Guigo,R., Smit,A., Dubchak,I., Rubin,E.M., Couronne,O.,
            Poliakov,A., Hubner,N., Ganten,D., Goesele,C., Hummel,O.,
            Kreitler,T., Lee,Y.A., Monti,J., Schulz,H., Zimdahl,H.,
            Himmelbauer,H., Lehrach,H., Jacob,H.J., Bromberg,S.,
            Gullings-Handley,J., Jensen-Seaman,M.I., Kwitek,A.E., Lazar,J.,
            Pasko,D., Tonellato,P.J., Twigger,S., Ponting,C.P., Duarte,J.M.,
            Rice,S., Goodstadt,L., Beatson,S.A., Emes,R.D., Winter,E.E.,
            Webber,C., Brandt,P., Nyakatura,G., Adetobi,M., Chiaromonte,F.,
            Elnitski,L., Eswara,P., Hardison,R.C., Hou,M., Kolbe,D., Makova,K.,
            Miller,W., Nekrutenko,A., Riemer,C., Schwartz,S., Taylor,J.,
            Yang,S., Zhang,Y., Lindpaintner,K., Andrews,T.D., Caccamo,M.,
            Clamp,M., Clarke,L., Curwen,V., Durbin,R., Eyras,E., Searle,S.M.,
            Cooper,G.M., Batzoglou,S., Brudno,M., Sidow,A., Stone,E.A.,
            Venter,J.C., Payseur,B.A., Bourque,G., Lopez-Otin,C., Puente,X.S.,
            Chakrabarti,K., Chatterji,S., Dewey,C., Pachter,L., Bray,N.,
            Yap,V.B., Caspi,A., Tesler,G., Pevzner,P.A., Haussler,D.,
            Roskin,K.M., Baertsch,R., Clawson,H., Furey,T.S., Hinrichs,A.S.,
            Karolchik,D., Kent,W.J., Rosenbloom,K.R., Trumbower,H.,
            Weirauch,M., Cooper,D.N., Stenson,P.D., Ma,B., Brent,M.,
            Arumugam,M., Shteynberg,D., Copley,R.R., Taylor,M.S., Riethman,H.,
            Mudunuri,U., Peterson,J., Guyer,M., Felsenfeld,A., Old,S.,
            Mockrin,S. and Collins,F.
  CONSRTM   Rat Genome Sequencing Project Consortium
  TITLE     Genome sequence of the Brown Norway rat yields insights into
            mammalian evolution
  JOURNAL   Nature 428 (6982), 493-521 (2004)
   PUBMED   15057822
COMMENT     REVIEWED REFSEQ: This record has been curated by Janet Young and
            Barbara Trask (FHCRC). The reference sequence was derived from
            JAXUCZ010000003.1.
            
            Summary: Olfactory receptors interact with odorant molecules in the
            nose, to initiate a neuronal response that triggers the perception
            of a smell. The olfactory receptor proteins are members of a large
            family of G-protein-coupled receptors (GPCR) arising from single
            coding-exon genes. Olfactory receptors share a 7-transmembrane
            domain structure with many neurotransmitter and hormone receptors
            and are responsible for the recognition and G protein-mediated
            transduction of odorant signals. The olfactory receptor gene family
            is the largest in the genome. [provided by RefSeq, Jul 2008].
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-915               JAXUCZ010000003.1  94353006-94353920
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..915
                     /gene="Or4c99"
                     /gene_synonym="Olr624"
                     /note="olfactory receptor family 4 subfamily C member 99"
                     /db_xref="GeneID:404847"
                     /db_xref="RGD:1333417"
     CDS             1..915
                     /gene="Or4c99"
                     /gene_synonym="Olr624"
                     /note="olfactory receptor gene Olr624; olfactory receptor
                     624"
                     /codon_start=1
                     /product="olfactory receptor Olr624"
                     /protein_id="NP_001000650.1"
                     /db_xref="GeneID:404847"
                     /db_xref="RGD:1333417"
                     /translation="MMHNNSVTEFILLGLTQDSEKQKAIFGVFLILYLMTLLGNFLIV
                     VTIKMSHTLSSPMYFFLFYLSFADACFSTTTAPRLIVDLLFQKKVITYNECMTQLFAA
                     HFFGCMEIFVLILMAFDRYVAICKPLRYTIIMNQRICGILVILAWLGSCIHSLAQIFL
                     ALILPFCGPNVIDHFFCDLQPLMKLACMDTYVINLLVVSNSGAICTISFIVLLISYIV
                     ILYSLRNHSAEGRRKALSTCTSHFIVVVIFFGPCIFIYTRPLITLPIDKMLSVFYTIG
                     TPLLNPLIYTLRNAEVKNAMKKVWCSKV"
     exon            1..915
                     /gene="Or4c99"
                     /gene_synonym="Olr624"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgatgcata acaacagtgt gactgaattc attttgttgg ggttgactca ggattcagaa
       61 aaacagaagg caatatttgg agtcttcttg attctttatc ttatgacatt actggggaac
      121 tttctcattg tggtgaccat taagatgagt cacacactta gcagtcccat gtactttttc
      181 ctcttctatt tgtcttttgc tgatgcttgc ttctctacaa ctacagcacc tcgattgatc
      241 gtggacttac tcttccagaa aaaagttatt acctacaatg aatgtatgac tcagctcttt
      301 gcagcccact tctttgggtg catggagatc tttgtgctta tccttatggc ctttgaccgc
      361 tatgtagcaa tttgtaagcc gctaaggtac actattataa tgaaccaacg catctgtggt
      421 atattggtaa ttcttgcctg gttagggtct tgtatccact ctttagcaca gattttcttg
      481 gctttaatat taccattctg tggtccaaat gtaattgatc actttttctg tgatttgcag
      541 cccttgatga aacttgcctg catggatacc tatgtgataa atttgctagt tgtgtctaat
      601 agtggtgcca tatgcacgat aagtttcata gtgcttctta tctcctatat tgtaatctta
      661 tactccctga gaaaccacag tgcagaagga agacgaaagg ccttgtctac atgtacttct
      721 catttcattg ttgtggtcat attttttggt ccctgtatat ttatatatac aagaccacta
      781 atcactctac caatagataa aatgttgtct gtgttttata caatagggac acctttgctc
      841 aatcctctta tctatactct gaggaatgca gaagtaaaaa atgccatgaa aaaagtatgg
      901 tgtagtaaag tatga
//
